| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2039 |
|---|
| Symbol | |
|---|
| ID | 5539517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2612614 |
|---|
| End bp | 2613762 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640894174 |
|---|
| Product | homoserine O-acetyltransferase |
|---|
| Protein accession | YP_001432145 |
|---|
| Protein GI | 156742016 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2021] Homoserine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0765159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAT ATGCTACAGA ACGCGCGCCA CTTGGCGTCG GTCTTGTTCA GACACGCTAT
GCCACCTGGC TCGAGCCGCT GATGCTCGAC AGCGGCGCAT TACTGGCGCC GGTGACGCTG
GCATACGAGA CGTATGGCGA ACTCAGCCCG GCGCGTGATA ATGCCATTCT GATCCTGCAC
GCGCTCTCCG GTGATGCGCA CGTTGCCGGT CGTCATAGCC TGACCGACCC CAAACCGGGA
TGGTGGGATG CTATGGTCGG TCCCGGTCGT CCCTTCGATA CCGACCGTTA CTTCATCATC
TGCTCGAATG TCATCGGCGG GTGCAAGGGA AGCACCGGAC CCTCCAGCAT TGACCCGGCG
ACAGGCAAGC CGTATGGCTT GCGCTTCCCG GTCATCACCA TTAGCGACAT GGTACGTGCA
CAGACGCGCC TGATCGATCA TCTGGGGATC GATCGATTGC TTGCTGTCGC CGGCGGCTCA
ATGGGTGGAT TTCAGGCGCT CGAGTGGGCA ACCGCATACC CGGAACGGGT GCGTAGCGCC
ATTCTGCTGG CGACAACAGC GCGTTCATCG GCGCAGACCG TGGCATGGAA CGCGATCGGG
CGCCGCGCGA TCATGGCCGA TCCGCGCTGG CGCGGCGGCG ACTACTACGG TTATGAGCCG
CCAGTCGATG GTCTGGCGAC AGCGCGCATG ATTGGGCACA TTACCTATCT AAGCGAACTC
TCCCTGGAGC GCAAGTTCGG GCGCGCGTTC CAGCGCGGCG CTCCTTCCTT CACAATGGAA
CAGGAATTCG CTATCGAAAG TTATCTCGAA CATCAGGGCG CAAGTTTCAA TGCCCGCTTC
GACGCTAATT CATACCTCTA CATTACCAAA GCCATGGATT ACTGGGACTT GCCGGCGCGC
TACGGATCGC TGGACAGAGC ATTTGCCCGC ACCCAGGCGC GCTTCCTCCT GCTGTCGTAC
AGCAGCGACT GGCTCTATCC AACAGCGGAG TCGCTCGCTA TCGCCGATGC GCTGCGCCGC
ATGCACAAGC CGGTCGAGCA TGTCGAGATC GCCTCGATCG CAGGTCACGA CGCATTTCTC
GTTGATATCG ATCAGCAAGC GCCGATTATT ACGGAGTTTC TCAACGGATT GACCCGCGAG
CGAGGTTGA
|
|---|
| Protein sequence | MIAYATERAP LGVGLVQTRY ATWLEPLMLD SGALLAPVTL AYETYGELSP ARDNAILILH
ALSGDAHVAG RHSLTDPKPG WWDAMVGPGR PFDTDRYFII CSNVIGGCKG STGPSSIDPA
TGKPYGLRFP VITISDMVRA QTRLIDHLGI DRLLAVAGGS MGGFQALEWA TAYPERVRSA
ILLATTARSS AQTVAWNAIG RRAIMADPRW RGGDYYGYEP PVDGLATARM IGHITYLSEL
SLERKFGRAF QRGAPSFTME QEFAIESYLE HQGASFNARF DANSYLYITK AMDYWDLPAR
YGSLDRAFAR TQARFLLLSY SSDWLYPTAE SLAIADALRR MHKPVEHVEI ASIAGHDAFL
VDIDQQAPII TEFLNGLTRE RG
|
|---|
| |