Gene Rcas_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2027 
Symbol 
ID5539505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2599862 
End bp2600563 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content57% 
IMG OID640894162 
Productchlorite dismutase 
Protein accessionYP_001432133 
Protein GI156742004 
COG category[S] Function unknown 
COG ID[COG3253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.557665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC AGGATCACGC TGCTGCTTCC GCAATTCCCT GGTTTGTGCA GTTCACTGCG 
TTCAAGGTTG ATCCTGCATG GCGTCGTTTG CCGCATACGG CGCGAGCCGA AGGGCGCGAG
GCGTTCGCCG GTGTGGTGGA GGAGTATGCC TCCTCGATCA CAACCTGGGC GTACAGCGGC
ATCGGCTTGA AGATCGGCGT CGATCTCCTC CTCTGGCGGC GTGGCGTCGA TCCCAAATTG
ATGCAGGAGA TGACGGCGCG CCTGCTGAGG AGTGGCATCG GGTGTTATAG CGAGATTTCA
TATCAATTGT TTGGCTATAC CCGTTCCTCG GTCTACACCC GCCGCCCCAC CAGTCAAGAG
CAGGCGATCG ATCTGAATGA TCGCCAGACC TACCTGATTG TCTATCCGTT CAGCAAAACA
ACCGAATGGT ACCTCATGAG CCGTGATGCC CGTCAGGGAA TGATGAATGA GCATATGCGC
GTTGGTCACG AGTATGCCGA CATCCGGCAG GTGCTGTTGT ATGCAACCGG GATCGACGAT
CAGGAGTTTG TCGTTGCGTA TGAAACCGAG GACCTGCCGC GGTTCAGCCA GTTGGTCACC
GATCTGCGCG CGACCGAAGC GCGCCGTTAT ACGCTGCGCG ACACGCCGAT CATTACTGCC
ATTCATTATC CTCTACGCGA CGCGCTGGCG CTGATTGGAT AA
 
Protein sequence
MADQDHAAAS AIPWFVQFTA FKVDPAWRRL PHTARAEGRE AFAGVVEEYA SSITTWAYSG 
IGLKIGVDLL LWRRGVDPKL MQEMTARLLR SGIGCYSEIS YQLFGYTRSS VYTRRPTSQE
QAIDLNDRQT YLIVYPFSKT TEWYLMSRDA RQGMMNEHMR VGHEYADIRQ VLLYATGIDD
QEFVVAYETE DLPRFSQLVT DLRATEARRY TLRDTPIITA IHYPLRDALA LIG