Gene Rcas_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1954 
Symbol 
ID5539432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2506669 
End bp2507103 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID640894090 
Producthypothetical protein 
Protein accessionYP_001432061 
Protein GI156741932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.752058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTACC AGTTTCTTCT TCTGGTTCAT GTGGTCTGTT TTGCGCTCTG GATGGGCGCC 
GTGGCTGCGT CTCTCCTGGT GGTGCGCACG TTCGAGTCGC GCCTGACGAC GATTGTTGGC
GATGTGACGA GCGATGCCGC GCTTCTGCGC GCCTACATTC GGCGCGAGGT CAAGTTCGTC
GACGTTGTGT TTGCCGGCGT CCTGGTCTCC GGCATCGTGC TGGCGCAGTT GTACACCGGC
TGGACGTCCT GGGTGCTGAC GAAGATCGGG CTGTTCGTCG CGCAGTTCGT GGCAACGATG
GCGTACATTC AGGTGTTCAT CCGTCCGTTG ACGTACCCCT GCCCGCCACA CCTCTACCGC
CGCTGGTATG GGTTGTTTGC CGTATCACTC GGTTTTTTCG CCATCACGTT GATGGTTGTC
TTTTTTGGAC GATGA
 
Protein sequence
MYYQFLLLVH VVCFALWMGA VAASLLVVRT FESRLTTIVG DVTSDAALLR AYIRREVKFV 
DVVFAGVLVS GIVLAQLYTG WTSWVLTKIG LFVAQFVATM AYIQVFIRPL TYPCPPHLYR
RWYGLFAVSL GFFAITLMVV FFGR