Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1954 |
Symbol | |
ID | 5539432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2506669 |
End bp | 2507103 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894090 |
Product | hypothetical protein |
Protein accession | YP_001432061 |
Protein GI | 156741932 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.752058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTACC AGTTTCTTCT TCTGGTTCAT GTGGTCTGTT TTGCGCTCTG GATGGGCGCC GTGGCTGCGT CTCTCCTGGT GGTGCGCACG TTCGAGTCGC GCCTGACGAC GATTGTTGGC GATGTGACGA GCGATGCCGC GCTTCTGCGC GCCTACATTC GGCGCGAGGT CAAGTTCGTC GACGTTGTGT TTGCCGGCGT CCTGGTCTCC GGCATCGTGC TGGCGCAGTT GTACACCGGC TGGACGTCCT GGGTGCTGAC GAAGATCGGG CTGTTCGTCG CGCAGTTCGT GGCAACGATG GCGTACATTC AGGTGTTCAT CCGTCCGTTG ACGTACCCCT GCCCGCCACA CCTCTACCGC CGCTGGTATG GGTTGTTTGC CGTATCACTC GGTTTTTTCG CCATCACGTT GATGGTTGTC TTTTTTGGAC GATGA
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Protein sequence | MYYQFLLLVH VVCFALWMGA VAASLLVVRT FESRLTTIVG DVTSDAALLR AYIRREVKFV DVVFAGVLVS GIVLAQLYTG WTSWVLTKIG LFVAQFVATM AYIQVFIRPL TYPCPPHLYR RWYGLFAVSL GFFAITLMVV FFGR
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