Gene Rcas_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1921 
Symbol 
ID5539399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2463821 
End bp2464141 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content61% 
IMG OID640894058 
Producthypothetical protein 
Protein accessionYP_001432029 
Protein GI156741900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.959872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00043776 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTTTCTG TCCTGACGGT ATGTTTCAGT CATCCTTCGT CTGCGCCGGC AATGGACGCT 
GCGCTCCGGT GCGGCATCCC CGACCTGCAA CAGGCGCTCC TCACCTTGCT GCAGCAACGC
GGCTGGCGCC ACAACCCCGA CGCGCCGCTG CTGGCAATGC TGGACGCGCC CTTCGGCTAT
GCGCCCTTCA TCCGACCTCA AGAGTTTTGG TACGGGAACC TGCCCGACTC GCGGTCTTTG
CCTGATGATT GCAGAACATG GCGCCGGTCG TCTATAATTT CTTCGGAAAG GGCGCCCTTG
CAGGGTCGTG TTTATTTCTG A
 
Protein sequence
MVSVLTVCFS HPSSAPAMDA ALRCGIPDLQ QALLTLLQQR GWRHNPDAPL LAMLDAPFGY 
APFIRPQEFW YGNLPDSRSL PDDCRTWRRS SIISSERAPL QGRVYF