Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1921 |
Symbol | |
ID | 5539399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2463821 |
End bp | 2464141 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894058 |
Product | hypothetical protein |
Protein accession | YP_001432029 |
Protein GI | 156741900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.959872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00043776 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTTTCTG TCCTGACGGT ATGTTTCAGT CATCCTTCGT CTGCGCCGGC AATGGACGCT GCGCTCCGGT GCGGCATCCC CGACCTGCAA CAGGCGCTCC TCACCTTGCT GCAGCAACGC GGCTGGCGCC ACAACCCCGA CGCGCCGCTG CTGGCAATGC TGGACGCGCC CTTCGGCTAT GCGCCCTTCA TCCGACCTCA AGAGTTTTGG TACGGGAACC TGCCCGACTC GCGGTCTTTG CCTGATGATT GCAGAACATG GCGCCGGTCG TCTATAATTT CTTCGGAAAG GGCGCCCTTG CAGGGTCGTG TTTATTTCTG A
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Protein sequence | MVSVLTVCFS HPSSAPAMDA ALRCGIPDLQ QALLTLLQQR GWRHNPDAPL LAMLDAPFGY APFIRPQEFW YGNLPDSRSL PDDCRTWRRS SIISSERAPL QGRVYF
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