| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1915 |
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| Symbol | |
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| ID | 5539393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2460765 |
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| End bp | 2461352 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894052 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001432023 |
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| Protein GI | 156741894 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000547521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGAAC GGGAAGCGAT CGCCAGGCTT CAGCGTGGCG ATATCAGCGG ATTGGAAGCG
CTGGTCCGGG CCTATTACGT GCGAGCAGTC CGCGCAGCCT ACCTTGTCGC TCACGACCGC
GATCTTGCTG AGGACATTGT ACAAAGCGCC TTTCTGCGAG CATACGAGCG GATTGACCAG
TTTGACGCCA GGCGCCCGTT CGGTCCCTGG TTTCTACGCA GCGTTGTCAA CGACGCGGTC
AAAGCAGCCT CCCGTCAGAC GCGGCGCATT TCGCTCGAGC GGATGACCGG GGATGAGGCG
AGCGCGCTGC TTGAACGCCT GGCTGACCCG CACGCAGGTC CTGATACGGA TGCGGAACAG
GCTGAAACGC GCGAGGCTGT TCGTGCTGCG CTACTCGCAC TCTCGCCCAT TCAGCGAGCG
TTGATTGTGC AGCGTTACTA CCTTGGGTTG AGCGAAGCCG AGATGGCCAA CAGCATGGAT
TGCCCGCCAG GGACGATCAA GTCGCGTCTG CACGCAGCAC GAGAACGACT CCGCGGGATC
CTCGCTCCGC TTCACCCGCT GACGACACGC TCAGAAGCGG ACAAATGA
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| Protein sequence | MDEREAIARL QRGDISGLEA LVRAYYVRAV RAAYLVAHDR DLAEDIVQSA FLRAYERIDQ
FDARRPFGPW FLRSVVNDAV KAASRQTRRI SLERMTGDEA SALLERLADP HAGPDTDAEQ
AETREAVRAA LLALSPIQRA LIVQRYYLGL SEAEMANSMD CPPGTIKSRL HAARERLRGI
LAPLHPLTTR SEADK
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