| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1912 |
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| Symbol | |
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| ID | 5539390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2458243 |
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| End bp | 2458962 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640894049 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001432020 |
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| Protein GI | 156741891 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00123339 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGCATC ATGACGCAGT CTATCCTTCG TCGACGCCGG CAATGGACGT TGTGCTCCGA
TGCGACATCC CCGACCTGCA ACAGGCGCTC CTCACCTTGC TGCAACAACG CGGCTGGCGC
CACGACCCCG ACGCGCCGCT GCTGGCAATG CTGGACGCGC CCTTCGGCTA TGCGCTGCGC
ACGCTCCCCG CCGCAGCGCT GGCGCACCGT CAAGTGGTGG TCGTCACGCA CAACCCCTGC
CCGGAGTACC GGGGCGACCT GTGGGAGTTC CGCTCGGCGA TCCTGCTGGC GAGTCAGTGC
CGTCTCCCGG CGCTCGAGCG CGCGCTGATC GACGCGGCCG CCGGTCGCCG CGCCCGTCTG
ACCCCGCCGC ACGCTTCGCC GCTGACGCCT GCTGAGCGCG CGGTCTTGCG CGCCATCGCC
CACGGACGGA CCAACCAACA GATCGCGCAG GACCTGCGCC TGTCGGCGCG CCGCATCGCC
AACCTGGGAC GGAGGTGTAC CGCAAACTGC GGCTGCCGGG ACGCAGTGCC GCCATCCTGT
ACTCCTGGGG ACGGCGGGAA CTGCTGGCTG CGCCGCACGG GGCATCCATC TGACCGCCTC
TGGAGGAACA TGTCGCAGAC CTGCCCCTTT CGCTGCTGCG TCGCGCCACG CGCGCAACGC
GCCATCTCTT CCGGCGCGCG ATCCAGGAGG AAGCTGGCGT GGTCCGCGCC AGCGTCATAG
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| Protein sequence | MGHHDAVYPS STPAMDVVLR CDIPDLQQAL LTLLQQRGWR HDPDAPLLAM LDAPFGYALR
TLPAAALAHR QVVVVTHNPC PEYRGDLWEF RSAILLASQC RLPALERALI DAAAGRRARL
TPPHASPLTP AERAVLRAIA HGRTNQQIAQ DLRLSARRIA NLGRRCTANC GCRDAVPPSC
TPGDGGNCWL RRTGHPSDRL WRNMSQTCPF RCCVAPRAQR AISSGARSRR KLAWSAPAS
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