Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1848 |
Symbol | |
ID | 5539326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2360928 |
End bp | 2362031 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893986 |
Product | dihydroorotase |
Protein accession | YP_001431957 |
Protein GI | 156741828 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0418] Dihydroorotase |
TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.100177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGAT TGGGGTGGCA GGGAGAAGTA AGGCGACCGT CACTTGAGGG AGGAACCATG ATCTATACCC TCATTTCACC CCTCGATATG CACATTCACT TCCGCGAGGG CGCAATGCTG CGTGCCGTGG CCCCGCTCTC GGCGCGCGAT TTTGCCGGCG GCGTCATTAT GCCGAACCTG GTTCCGCCGG TAGACAATCT GGATCGCCTG GTGCGTTACC GTGCCGAGAT TGATACAGCA ATCGGCGGTA TGGGGTTCAC GCCATACATG ACTCTCTTCT TCCGCGCTTA TAGCGAAGCG GAACTGCGTG CTGCGCGACC GCATATCATC GGCGTCAAAC TCTACCCCGC CGGTGTGACG ACCAACAGCG AGGCAGGAGT GCAGAGCATC CGCGATGCTG AGCCGACGCT GGCGCTCATG GAAGACCTCG GCATTCCGCT CCTGGTTCAC GGCGAGACCG GCGGGTTCGT GCTCGACCGT GAGCGCGAGT TTCTGCCAAT CTATGCGCAC CTGGCGCGTC GCTTTCCACG GTTGACGATT GTGATGGAAC ATATCACGAC CCGCGAGGCA GTGGCGCTCC TCGACGACTC TCCCAATCTC TACGCGACCA TTACCCTTCA TCACCTGCAA ATCACGCTCG ATGACGTGGC TGGCGGATTG TTGCAACCGC ACCTGTTCTG CAAGCCGATT GCCAAGCGTC CCGAGGATCG CGCGGCATTG TTGCAGGCGG CGCTCACGCC GCACCCGAAG GTGATGTTTG GCAGCGACTC CGCGCCGCAT CCGGTGCATG CCAAGGAAGC CGCCGCATGC GCGGCTGGCG TGTTCAGCGC GCCGGTTGCG TTGCCGTTGC TGGCGGAGAT ATTCGCGCAG CACGACGCGC TCGACCGGTT GCAGACGTTT GTCTCGGATA ACGCACAGCG CATTTACGGT GTGACTCCGC CGTTCAAACG GGTTGTTCTG CGCCGCGAGT CATGGTGTGT GCCGCAGCGC TATGGCGAGG TGACGCCATA CTATGCCGGA CGCACGATCG AGTGGCGGGT CGTTCGGGAT TCGGGGGAGC AGGGTCAGGA GGGCGCTCGG GCCGACGCTA ACGCGCCGAA CTGA
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Protein sequence | MPRLGWQGEV RRPSLEGGTM IYTLISPLDM HIHFREGAML RAVAPLSARD FAGGVIMPNL VPPVDNLDRL VRYRAEIDTA IGGMGFTPYM TLFFRAYSEA ELRAARPHII GVKLYPAGVT TNSEAGVQSI RDAEPTLALM EDLGIPLLVH GETGGFVLDR EREFLPIYAH LARRFPRLTI VMEHITTREA VALLDDSPNL YATITLHHLQ ITLDDVAGGL LQPHLFCKPI AKRPEDRAAL LQAALTPHPK VMFGSDSAPH PVHAKEAAAC AAGVFSAPVA LPLLAEIFAQ HDALDRLQTF VSDNAQRIYG VTPPFKRVVL RRESWCVPQR YGEVTPYYAG RTIEWRVVRD SGEQGQEGAR ADANAPN
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