| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1828 |
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| Symbol | |
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| ID | 5539306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2336606 |
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| End bp | 2338195 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893966 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001431937 |
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| Protein GI | 156741808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGAACG AAACGGCGTC CATCTTCCTG CTCGCAGTTG CTGCGCTCAT ACCACTGCTC
CTGGGCGCAG CCTGGGCATG GCAACGCTTC TACCGCGAAG ACCAGTCCGA CACTGCGCGC
ACCATCGCCA AAAACAGTGC GCTGCCCATT GCTGCAAATC TGATCAACAA GGCGATCGAC
TTCGGGTTTG CGGTCATCGC GCTGCGCTTC CTGGGACCGG AAGGGAATGG CGCGTATGCG
TTCGTTGCCC TGATCGCCGG TCTTTATTTT CTCACAATCA CAAACTGGGG CTTGAACGAT
CTGACAGTGC GCGAAGCCGC GCCCGACCTA TCGCGCGCGC CGCGCCTCTT CAGCATCACC
TTGCTGCTCC GGCTCGGCAT CACAACCCTG CTGCTCCCGA TTGCTGCGCT CCTCGTCGTC
GGCTATTCGC TGCTCGAACG CCCGCTAAGC AGCGCCGAGA TCACCGCGCT GGCGTTGCTG
ATGCTGCACC TGTACCCGGC GGCGCTCGCC GCCGCCTGCT CGGCGTCGTT CCAGGCATAT
CAGCGCATGG AAGTGACGGC GCTGGTGGTG CTGCTGACAA ATGTCGTCAA AACGCTCGCA
GGGGTTGGGG CGCTGCTGAT CGCGCCGGAT GCGCCCGCGC GGGTGGTGGC GCTGGCAGCC
GTGGCGCTGG CAGCGACGGT CCTGAATGCT GTGATCTTCT ATATCCTTCA ACGGCGGATG
CTCTTTCGCG CGCCACTGGT ATGGGACTGG CCCACCGGAC GTGATCTGTT GCGCGAGGGG
TTTCCGCTGC TGCTGAACAG TCTGTTGCTG GCCGTCTTTT TCCGTTTCGA TGTGGTGCTG
CTGCGAGCGC AGGCGGGAGT TGCCGCGCTC GGTCTGTACG ATGCGGCGTA CAAAGTCATC
AATATGACAC AAATTGTGTC GCCCTATTTT GTGGCGGCGC TGTTCCCTTT GCTGGCGCGC
TATGCAGTGA CGGATCGCGC CGCCCTCGAG CGGATGTACC ACCGCGCGCT TGGGCTGCTG
CAACTCGTCG CCTGGCCCGT TGCTGTCGGC GGAACGCTCC TGGCGCCGGT CATCATTGCC
GTGCTTGGCG GGCGGGCATT TCTGCCAGGC GCGGCGCTGG CGCTGGCGAT CCTGATCTGG
TACCTCCCGC TTTCGTATGC GAATGGGGTG ACACAGTACG TGCTCATTGC TCTGCGACGC
CAGCGCGCAA TTACGGTAGC GTTCGTCATT GGTGCGGTGT TCAACCTGGG GATGAATCTG
CTGCTCATCC CAGCGTATGG GTATCTGGCA GCCGCATCTG TGACAGTTGC CACGGAGGTG
GCGCTGTTGC TACCATTTTT GCGCACCCTG CGACGTGAAG GGGCGATGCC GCCGCTCCTG
CGCCTCATGT GGCGCCCGGC TCTTGCCTCG CTCATCATGG GCGCCGCCAT GTGGCCCGCG
CTTGTGCTCT CACCGTGGCT GGCAATTGCC GTTGGAGCGT CGGTCTACCC GGCGGCGCTC
TGGGCGCTTG GCGCATTCGG TCCAGAAGAA CGGGCGCTGA TGCGCCGAAT GCTGAGCAAA
AGCGGCGTAT CTTCTGGTGG GGCGCATTAA
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| Protein sequence | MLNETASIFL LAVAALIPLL LGAAWAWQRF YREDQSDTAR TIAKNSALPI AANLINKAID
FGFAVIALRF LGPEGNGAYA FVALIAGLYF LTITNWGLND LTVREAAPDL SRAPRLFSIT
LLLRLGITTL LLPIAALLVV GYSLLERPLS SAEITALALL MLHLYPAALA AACSASFQAY
QRMEVTALVV LLTNVVKTLA GVGALLIAPD APARVVALAA VALAATVLNA VIFYILQRRM
LFRAPLVWDW PTGRDLLREG FPLLLNSLLL AVFFRFDVVL LRAQAGVAAL GLYDAAYKVI
NMTQIVSPYF VAALFPLLAR YAVTDRAALE RMYHRALGLL QLVAWPVAVG GTLLAPVIIA
VLGGRAFLPG AALALAILIW YLPLSYANGV TQYVLIALRR QRAITVAFVI GAVFNLGMNL
LLIPAYGYLA AASVTVATEV ALLLPFLRTL RREGAMPPLL RLMWRPALAS LIMGAAMWPA
LVLSPWLAIA VGASVYPAAL WALGAFGPEE RALMRRMLSK SGVSSGGAH
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