Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1785 |
Symbol | |
ID | 5539263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2291294 |
End bp | 2292505 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893924 |
Product | hypothetical protein |
Protein accession | YP_001431895 |
Protein GI | 156741766 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCT CGTATGCCGA ACTTGCTTCG CTGACATGTC CCGTCTGCCG CACGTCGTTC GAGGCGGAGA TTTGGACGAT TGTCGATGCG CGGGAACGTC CCGATCTGGC GGGTATGTTG CTGTCGGGCG AACTGAACAT GGTGACCTGC CCACAGTGCG GTCATCAGGC GGATGCGGGC GGCCCGCTGC TCGTCCACGA TCCGGACGGG CGGCGTGTCT ATTTTGCAGC GCCTGCCGAT GCTCCCGAAC ATGTGTGGCG CGAACGGGCG CGGGAATTGC TGTATGTGCT GGTCGGCAGC CTTCCCGAAG AAGCGCGTCT TCCTTATCTC GGCGATGTGC AGGTGGAAGT CGAGTCCGGC GGCGTGCGCA AGGCGCTGCT GCGTCGCGGC AGGCGCTTCG CTCCACCTCC GTCGATTGCT CCCAAACCTT CCCGCAATGT TCACACGTCT TCTCCTCCGG TTGAACGATT GGATATCGCT GCCGCGCCCG ATGCGGTTGT CGTAGCCATT GAGGAACTGA TTGCCGCCGA TACCGCTACA GAGGCGGCTG CGGTGGTCAA TCGGCATCCC GTCCTTGCGA CACCGGATGC CGATGTGGTC ATCGAACAAC TCATCAGCGC TGCGCGCGCG CACGGGGAAC ACGACATCGC GCGCGCACTG ACCGAGGCGC GGGTGTTGCT CCACGATCTG CGCGCTGGTG TGGCGCCCGG CGATCGGCAG GATACGCGCG CTGCTCCTGC TCTCGCTGAT GTCGAAGGAA TACGCCTCGC GGACGTGGCG TATCAAGCGT TTCTGCGCAC CGAAAGCCTC CCTGCGTTGC GTGAAGCCGT CGCCGATTAT CCGGTTCTGC TCGAACCGTG GGCGGACGAG GACCTGGCAG CGCGTGTCGA TGCCGCGCTG GACGAGGGGA ACGAACATCT GGCGCAGGCG ATTGAACTGC GCCGTGATGC GCTTACGCGC CTGCGCGTAG AAATGACCGG CGCTGAAGGG TTGCATCAGG CGATCGATGC GCTATTGCGC GCTGGTCACG AGCCTGATGC GCTCGCGGCA GTCGTTGGCG AGTATCCTGC ACTGCTGACC GATGCGGCGC ACACTGCGCT GTTCGAACTG GCTGCTGGCG CCCGCGCTCG CGGCGATCAC GCGCTGGCAG AGTATGCGGT TGAGTGCCGC GCTTTACTTC GTCGTGTTCG AGAGGGGCTT CAGGAGGAGT GA
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Protein sequence | MSISYAELAS LTCPVCRTSF EAEIWTIVDA RERPDLAGML LSGELNMVTC PQCGHQADAG GPLLVHDPDG RRVYFAAPAD APEHVWRERA RELLYVLVGS LPEEARLPYL GDVQVEVESG GVRKALLRRG RRFAPPPSIA PKPSRNVHTS SPPVERLDIA AAPDAVVVAI EELIAADTAT EAAAVVNRHP VLATPDADVV IEQLISAARA HGEHDIARAL TEARVLLHDL RAGVAPGDRQ DTRAAPALAD VEGIRLADVA YQAFLRTESL PALREAVADY PVLLEPWADE DLAARVDAAL DEGNEHLAQA IELRRDALTR LRVEMTGAEG LHQAIDALLR AGHEPDALAA VVGEYPALLT DAAHTALFEL AAGARARGDH ALAEYAVECR ALLRRVREGL QEE
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