Gene Rcas_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1785 
Symbol 
ID5539263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2291294 
End bp2292505 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID640893924 
Producthypothetical protein 
Protein accessionYP_001431895 
Protein GI156741766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCT CGTATGCCGA ACTTGCTTCG CTGACATGTC CCGTCTGCCG CACGTCGTTC 
GAGGCGGAGA TTTGGACGAT TGTCGATGCG CGGGAACGTC CCGATCTGGC GGGTATGTTG
CTGTCGGGCG AACTGAACAT GGTGACCTGC CCACAGTGCG GTCATCAGGC GGATGCGGGC
GGCCCGCTGC TCGTCCACGA TCCGGACGGG CGGCGTGTCT ATTTTGCAGC GCCTGCCGAT
GCTCCCGAAC ATGTGTGGCG CGAACGGGCG CGGGAATTGC TGTATGTGCT GGTCGGCAGC
CTTCCCGAAG AAGCGCGTCT TCCTTATCTC GGCGATGTGC AGGTGGAAGT CGAGTCCGGC
GGCGTGCGCA AGGCGCTGCT GCGTCGCGGC AGGCGCTTCG CTCCACCTCC GTCGATTGCT
CCCAAACCTT CCCGCAATGT TCACACGTCT TCTCCTCCGG TTGAACGATT GGATATCGCT
GCCGCGCCCG ATGCGGTTGT CGTAGCCATT GAGGAACTGA TTGCCGCCGA TACCGCTACA
GAGGCGGCTG CGGTGGTCAA TCGGCATCCC GTCCTTGCGA CACCGGATGC CGATGTGGTC
ATCGAACAAC TCATCAGCGC TGCGCGCGCG CACGGGGAAC ACGACATCGC GCGCGCACTG
ACCGAGGCGC GGGTGTTGCT CCACGATCTG CGCGCTGGTG TGGCGCCCGG CGATCGGCAG
GATACGCGCG CTGCTCCTGC TCTCGCTGAT GTCGAAGGAA TACGCCTCGC GGACGTGGCG
TATCAAGCGT TTCTGCGCAC CGAAAGCCTC CCTGCGTTGC GTGAAGCCGT CGCCGATTAT
CCGGTTCTGC TCGAACCGTG GGCGGACGAG GACCTGGCAG CGCGTGTCGA TGCCGCGCTG
GACGAGGGGA ACGAACATCT GGCGCAGGCG ATTGAACTGC GCCGTGATGC GCTTACGCGC
CTGCGCGTAG AAATGACCGG CGCTGAAGGG TTGCATCAGG CGATCGATGC GCTATTGCGC
GCTGGTCACG AGCCTGATGC GCTCGCGGCA GTCGTTGGCG AGTATCCTGC ACTGCTGACC
GATGCGGCGC ACACTGCGCT GTTCGAACTG GCTGCTGGCG CCCGCGCTCG CGGCGATCAC
GCGCTGGCAG AGTATGCGGT TGAGTGCCGC GCTTTACTTC GTCGTGTTCG AGAGGGGCTT
CAGGAGGAGT GA
 
Protein sequence
MSISYAELAS LTCPVCRTSF EAEIWTIVDA RERPDLAGML LSGELNMVTC PQCGHQADAG 
GPLLVHDPDG RRVYFAAPAD APEHVWRERA RELLYVLVGS LPEEARLPYL GDVQVEVESG
GVRKALLRRG RRFAPPPSIA PKPSRNVHTS SPPVERLDIA AAPDAVVVAI EELIAADTAT
EAAAVVNRHP VLATPDADVV IEQLISAARA HGEHDIARAL TEARVLLHDL RAGVAPGDRQ
DTRAAPALAD VEGIRLADVA YQAFLRTESL PALREAVADY PVLLEPWADE DLAARVDAAL
DEGNEHLAQA IELRRDALTR LRVEMTGAEG LHQAIDALLR AGHEPDALAA VVGEYPALLT
DAAHTALFEL AAGARARGDH ALAEYAVECR ALLRRVREGL QEE