| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1762 |
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| Symbol | |
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| ID | 5539240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2265345 |
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| End bp | 2266319 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893901 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001431872 |
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| Protein GI | 156741743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC ACATCCTTCT TCCGCTCGAT GGGTCCACGA CTGCCGAAGC CGTGATTCCT
TACGCCGTAT CGCTGGCACG TGCAACCGGC GCCTCGCTCC TGTTGCTGAG GATCGTGACA
CCCGGCGAGA TCAGCCAGTC CCTCTTCTGG AAGACGACCA TTCCGGCAGA ATTGCGCCGG
GAATGGACCG AAGAAGTGCT GGCGCGCACC AACATGTACC TGGCGAGTGT GGCAGAACGG
CTGCACTCGA TGAGTCTGCG CGTATCGTTC GACGTGCAGC CGGCCGATGA CGCTGCTGCC
GCCATCATTG CGCGTGCAGA ACACGAACCT GGAGTGGGAT TGATCGCAAT GACAACTCAC
GGCTACGGCG GCGCGCTGCG CTGGGCATTC GGCAGCGTCG CCGCGAAGGT GCTGCACGCT
GCGCCGACGC CACTGCTCGT CGTGCGCTCA AACGGCGGCG CGCGCCCGCC GGTCGCCGAA
GTCGCCTACC GCACCATCTG CGTCCCGCTC GACGGTTCAC TGCTCGCGGA ACAGGCGCTT
GCCGAAGCCC AACTGATCGC CGCACGCACT GGCGCTGCAC TCGTGCTCAT CAGCGTCGTC
GCACATACCG ACGATGGCGC CATCGAAGCG CGCGAGTACC TGGAACGAAT CGCCGATCAG
TTGCGCGCCC GCCAGATAGA CGCGCGCGCG CGAGTCGCCG AAGGCGCGCC TGCCGAACAA
ATCATCCGCG CGGCAGAAGC AGAGGAGGCC GATCTGATTG TCATGGCGAC CCATGGACGC
ACCGGTTTGC AACATCTATG GCTGGGCAGC ATTGCAACAA AGGTGGTGCA CGACTCGGCG
CTGCCGGTGT TGCTGGTGCG CGCACAAGAT GAGGAAGCCT TATACCAATC ACCTGTGACC
ATCCGGCATG GTCACCCCGA GCAGAGCGAG GGGTCGTGCG CGACCCGCTC AGATTCCTCG
CTGAGTTTAC CCTGA
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| Protein sequence | MTRHILLPLD GSTTAEAVIP YAVSLARATG ASLLLLRIVT PGEISQSLFW KTTIPAELRR
EWTEEVLART NMYLASVAER LHSMSLRVSF DVQPADDAAA AIIARAEHEP GVGLIAMTTH
GYGGALRWAF GSVAAKVLHA APTPLLVVRS NGGARPPVAE VAYRTICVPL DGSLLAEQAL
AEAQLIAART GAALVLISVV AHTDDGAIEA REYLERIADQ LRARQIDARA RVAEGAPAEQ
IIRAAEAEEA DLIVMATHGR TGLQHLWLGS IATKVVHDSA LPVLLVRAQD EEALYQSPVT
IRHGHPEQSE GSCATRSDSS LSLP
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