Gene Rcas_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1740 
Symbol 
ID5539218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2239997 
End bp2240476 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID640893879 
Productphosphohistidine phosphatase, SixA 
Protein accessionYP_001431850 
Protein GI156741721 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.407781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.94353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCT ATCTGCTCCG CCATGCGATC GCGGAAGAGC GCTCGAACGA CGGCAGCGAC 
TCGGCGCGGA TGCTCACTCC CGAAGGTGCC GAGAAGATGC GCATTGGCGC GCGCGGACTG
CGGCGGCTCG GTGTGGCGAT CGACCGGTTA CTGACCAGCC CGCTGACCCG CGCCCGCGAA
ACCGCCGAGA TCGTCGGCGC CGCGCTGGAT GTTGCTCCTG AGACGGTCGG TGCGCTTGCG
CCGGGGTGCA ACGCAGCGAC GCTGATCGAT CTGCTGGCGG ATATGCCGCG CGCAAAGAGC
GTCATGGTCG TCGGACACGA ACCGGACCTC AGCAGCATGA TCGCCGACCT GACCGGCGGC
AGCCGGGTTG TGATGAAGAA AGGAGGGTTG GCATTGATCG ACCTGTCATC GTTCGAACTC
AGCGCCGGTT CGTTGCTCTG GGTGTTGCCG CCGAAGGTGT TGCGAGCGCT TGGGAAGTAG
 
Protein sequence
MELYLLRHAI AEERSNDGSD SARMLTPEGA EKMRIGARGL RRLGVAIDRL LTSPLTRARE 
TAEIVGAALD VAPETVGALA PGCNAATLID LLADMPRAKS VMVVGHEPDL SSMIADLTGG
SRVVMKKGGL ALIDLSSFEL SAGSLLWVLP PKVLRALGK