| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1728 |
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| Symbol | |
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| ID | 5539206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2223509 |
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| End bp | 2225428 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893867 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431838 |
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| Protein GI | 156741709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.633344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTC TCCCTGATCG TCATCGTTCA CCGCGTTCCG GGCGTGTGCC CGCGCGCTGG
ACATTCTATG AAGTGCTGCT GATTGCGTTG AGTGTGGCGC TGATCATCTT CCCGCTCTAT
GCAGAAGTCT ATCGCTGGGT GTATCCCGCT TTTGCGCCAG CCGCTCCGCG CGTCCAGGAA
GCGCCGACCG ACACGCCAAC CGACGTGCCG TCCGAGGCGC CGACCGACGC GCCCGCTGAG
CCGCAGGCGC GCGTGACCGA AACCCCCGAA CCAAGCCCAA CAGCCGGTCC AAGCCCCACG
AGCAGCCCAA CGTCGGTGAA CACTCCGACG CCGACCAGTA CGCCAACCGC AACACCGGGC
GACCAGACGC CGGTGGCGAC CAATACACCG ACTCCGACCA GCGATGCGGG GGTGACGATC
ACGCCAATTC CGACGTTCTC GCCTACCAGA ACGCCAACGT TTACCTCCAC GCCTGGTCCC
AGCCCGACGC CGGTGCTCGG CGTCCCGCCG TTGACCCTTT CGAAGTCCGC CTCGGTGCAG
TTTGCTTCGC CAGGACAGGA ATTCACCTAT TCGCTGGTGG TTGACACGAA TTCATCGGTT
CCGATCCAGA TTGAGGTGCG CGATCCGATT AATGCGCAAC TGGAGGTGAC CGGAACGAGC
GTTTCAAACG GGTCGTGCCA GGTAAGCGGC AATACCGTTG TGTGTAATGT TACTGCCGTT
GTCAATCAAC CGGTGTCGAT CAATATCAAT GTCCGTGTGC GCACCGGCAT TCAATCCGAA
ACTCTTATCG CCAACCAGGC GGCAGCGCAG GACGCGCGCG GTTTCACGGC AGCCTCCGAT
TCGGTATCTG TGCGCATTCC GGGCGGCATC ATTCCGCCGA CGCCGTCGCC GGACCCCAAT
CGGCCAACGT CGCCGCCAGC AACCCCAACA CCGCCAATTG CTCCTTCGCC AACCCAGCCG
TCAACCCCGC CACAACCACC GGCGCCTCCG CCTTCCGGCG GCGATGGCGG CGGAGGAGGC
GGCACTCCCC CGGAAGGCGC GCCGCCTCCT CCGCCGGTGA TCGACCTGGT GCTGCCGCCG
ACGCCGGCGC CGGTTGCGCC AGCGCCGCAA CAGCCGCAAC AGCCGCGTCC GACTCGCTCC
GCCGGTACTG GAGGCGCGCG TACTGCGACG CCAACGGCAT CGCCGACGAC GATTGCTGCC
ACCGACGCGA TCTTCTTCCG CATGGCGAGC AACTGGGGGA GTGCCTTCCC CGGTGATGCC
GTGACGTATG TGATCGCTGT GCGCAATACG CATCCGTCCA ATTCACTGCG CGATCTGGCG
CTGCGCAGTG TGTTTCCGGC AAATCTGGAG ATCACCGGTC TTTCCTCCGG TCCGATCGAT
CGCAATACGC CAGGGGCATT CACCCCCGGT GATCCGTCGC GCACCGACAA CCGCATTTCA
CTGGGGGTCG CCGAGTTGCC TGCCGGTCAG GGGTTCGAGG TGATCGTCCA GACGAAGATT
AAGCCGAATG TGTCGGGCGG GACACGTATC GTGGCGCAGG CGGAATTGAC CTTTGCCGGT
CTCGCTATCC CGCTCTATTC GAATATCGTC ACTGTCGAAG TGGTCAACGC GGCGCAGGCG
CAGGTTCTGC CGACGGATAC GGCGACCGCA ACGCCAACTG AAGCGCCAAC CGCGATGCCG
ACCAGCACGT TGACGCCTGT GCCGGCCACC GAGCCGCCGA CGGTGGTAGT CGAAGCGGGG
CAACCGGCGG CAGTCGCGCC AACGGCGACA CCCGGCGCGG CTGGGAGCGT CGTCGGTTCA
GCGGGGACAG CGCCGTTGCC GGCAACCAGC ACCGGAGTTC CGCTGGCAGG CTTTGCGCTG
CTCGGCGCAA CGCTCCTGGC GCGCACATGG CGGCTCCATC GCGCGAAGTC GCGTATCTGA
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| Protein sequence | MQRLPDRHRS PRSGRVPARW TFYEVLLIAL SVALIIFPLY AEVYRWVYPA FAPAAPRVQE
APTDTPTDVP SEAPTDAPAE PQARVTETPE PSPTAGPSPT SSPTSVNTPT PTSTPTATPG
DQTPVATNTP TPTSDAGVTI TPIPTFSPTR TPTFTSTPGP SPTPVLGVPP LTLSKSASVQ
FASPGQEFTY SLVVDTNSSV PIQIEVRDPI NAQLEVTGTS VSNGSCQVSG NTVVCNVTAV
VNQPVSININ VRVRTGIQSE TLIANQAAAQ DARGFTAASD SVSVRIPGGI IPPTPSPDPN
RPTSPPATPT PPIAPSPTQP STPPQPPAPP PSGGDGGGGG GTPPEGAPPP PPVIDLVLPP
TPAPVAPAPQ QPQQPRPTRS AGTGGARTAT PTASPTTIAA TDAIFFRMAS NWGSAFPGDA
VTYVIAVRNT HPSNSLRDLA LRSVFPANLE ITGLSSGPID RNTPGAFTPG DPSRTDNRIS
LGVAELPAGQ GFEVIVQTKI KPNVSGGTRI VAQAELTFAG LAIPLYSNIV TVEVVNAAQA
QVLPTDTATA TPTEAPTAMP TSTLTPVPAT EPPTVVVEAG QPAAVAPTAT PGAAGSVVGS
AGTAPLPATS TGVPLAGFAL LGATLLARTW RLHRAKSRI
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