| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1663 |
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| Symbol | |
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| ID | 5539139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2144150 |
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| End bp | 2144827 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640893800 |
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| Product | phosphatidylserine decarboxylase-related |
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| Protein accession | YP_001431773 |
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| Protein GI | 156741644 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0438532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00396912 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGATA ATGACCGTGC ATCAGATGCT TTACCGCGTA TCCCCGGCTT TGAACCGGCA
GCGACGCCGA TTGTCAGCCT CGGGCTTGGG CTTGCCGGCA TCCTGCTGCG CGTCCGCCCG
CGCCTTGCGC CTTTGCCGCT GGCGCTCACT GCGGCGGCGG CGCTCCTCTG CCGCGACCCG
GAGCGCGCAA CGCCCGACGA CGCCGATGCG CTCTTCGCGC CTGCCGACGG CGTTGCCCAC
GGCACGAATG AACTCTACGA GCACCGCTTT CTCCATACCG ACGCTGTTCA ACTGTCGATC
AACGTCTCGC CGTTCGATGT GGCAGTGCAG CGCAGCCCGG CGTCTGGCAC AATCGACTAT
CTGGAGCATT ACCCTGCGGA CCTGCTCCCC CTTCACGCCG CACACGACGT TGCCCGGCGT
ACTGAACGGC TCTTTCTGGG CATTTCGACA GCGTGGGGAC CGCTGTTGCT CGTGATTACG
GCGCGCATCC CCGGGCAACC GGTCACGCCG CTGGTTCGCC TGGGGGATCG AGTGCGCGCC
GGTCAGCGGT TGGCGCGTGT GCGCTTTGGC AGTCGCGTCG ACCTGCTGGC GCCACGTGAT
CTGATCGAAT GGCAACCGGC GCCCGGCGCC CGGCTACGCG CCGGTGTGTC GCTCATCGGT
CAGGTCGTGC TGTTGTAG
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| Protein sequence | MGDNDRASDA LPRIPGFEPA ATPIVSLGLG LAGILLRVRP RLAPLPLALT AAAALLCRDP
ERATPDDADA LFAPADGVAH GTNELYEHRF LHTDAVQLSI NVSPFDVAVQ RSPASGTIDY
LEHYPADLLP LHAAHDVARR TERLFLGIST AWGPLLLVIT ARIPGQPVTP LVRLGDRVRA
GQRLARVRFG SRVDLLAPRD LIEWQPAPGA RLRAGVSLIG QVVLL
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