| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1634 |
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| Symbol | |
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| ID | 5539110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2111332 |
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| End bp | 2112915 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893771 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431744 |
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| Protein GI | 156741615 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00487663 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGATGA CTGCCGAGCC TGAGATCGTT CTCGAAGCGC GCAATATCAC CAAACGCTTC
CCCGGCGTCG TGGCGAATGA GCAGGTCAGC CTGACGCTGC GGCGTGGCGA GGTGCTGGCG
CTCCTTGGCG AGAATGGCGC CGGCAAGACG ACGCTGATGA ACATTCTCTA CGGTTTGTAT
CATCAGGACT CAGGCGAGGT GTTGATCCGC GGCGAGCCGG TGCGGATCGG CGGACCAAGC
GACTCGATCA GGCGCGGGAT CGGCATGGTT CATCAGCACT TTATGCTGGT GCCGGTCTTC
ACGGTTGCCG AAAATATCAT TCTTGGCGCC GAAACGGTTA AGGGTCCTTT CCTCGATCTC
AATATCGCCC GTCAGCGCAT CCGTGAGTTA TCGCGGCAGT ACCATCTCGA CGTTGATCCC
GATGCCTATG TGAAAGACCT GTCGGTTGGT CAGCAGCAAC GGGTCGAGAT TATCAAGGCG
CTCTATCGCA ATGCCGATAT TCTGATTCTC GATGAGCCAA CAGCCGTACT GACGCCGCAG
GAAACCGAAG AACTGTTCGC CATTATTCGC TCATTGACCG CGCGGGGCGC GTCGGTCATT
TTTATTTCGC ACAAACTGAA GGAGGTGCTG GCGATTGCCG ATCGGATTAT CGTGCTCCGG
CGCGGGCGTG TGGTTGGCGA GACGACGCCG CGCGAAGCGA CCGAACGCAG CCTGGCGGAG
ATGATGGTCG GTCGCAGCGT CATGCTGGAA GTCGAAAAAG GCGAAGCGCA TCCTGGCGCG
CCGATGCTGG TGCTCGAAGA TGTTACCGTC CTCGATGATC GCGGTCAACA GGTGGTCAAT
GGCGTATCGC TCGAAGTCCA CGCTGGCGAA ATCCTGGGCA TTGCCGGCGT TCAGGGAAAT
GGCCAAACCG AGCTTGTCGA GGCGATCACC GGTTTGCGCC CGGTGCATTC AGGAAAGGTG
CGGATCAACG GGCGCGATGT GACGAATGCT TCGCCGCGTC GTATTAGCGA AACCGGTTGC
GCCCACGTTC CCGAAGATCG CCAGGAAGAC GGCCTGGTGC TGACCTACAG CGTCGCCGAT
AACCTGGTGC TCAACACCTA CTATACGCCG CCGTTCGCGC ATGGTGTGAT CCGGGATGAT
CGCGCGATCC TCGACCATGC GGTCCGCCTG ATTGAACGGT ACGACGTGCG CACTCCCAGC
GCCCTCACGC TGGTGTCGGC GCTTTCCGGC GGCAACAAGC AGAAGGTGAT CATTGCGCGC
GAACTCTCAC GCGAAGGGCG CCTGCTCGTC GCTGCCCAAC CGACCCGTGG CATCGATGTC
GGTTCGATTG AGTTCATTCA CCAGCAGATC GTCGCCGAAC GCGACCGGGG CGCCGCCGTG
TTGCTCGTCT CGGCGGAACT CGACGAGATT ATGGCGCTCT CCGACCGGAT CGCCGTGATG
TATCACGGAC GGATTGTGGC GACTCTGCCC GCCGCAAGCG CCACACGCGA AGAGTTGGGG
CTGCTCATGG CTGGCGTACA ACCGGTCGGC GCCTTGCGCG AATCGACGAC CGACGGGTAT
GGAGAGGTGA ATGTTCAACG TTGA
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| Protein sequence | MTMTAEPEIV LEARNITKRF PGVVANEQVS LTLRRGEVLA LLGENGAGKT TLMNILYGLY
HQDSGEVLIR GEPVRIGGPS DSIRRGIGMV HQHFMLVPVF TVAENIILGA ETVKGPFLDL
NIARQRIREL SRQYHLDVDP DAYVKDLSVG QQQRVEIIKA LYRNADILIL DEPTAVLTPQ
ETEELFAIIR SLTARGASVI FISHKLKEVL AIADRIIVLR RGRVVGETTP REATERSLAE
MMVGRSVMLE VEKGEAHPGA PMLVLEDVTV LDDRGQQVVN GVSLEVHAGE ILGIAGVQGN
GQTELVEAIT GLRPVHSGKV RINGRDVTNA SPRRISETGC AHVPEDRQED GLVLTYSVAD
NLVLNTYYTP PFAHGVIRDD RAILDHAVRL IERYDVRTPS ALTLVSALSG GNKQKVIIAR
ELSREGRLLV AAQPTRGIDV GSIEFIHQQI VAERDRGAAV LLVSAELDEI MALSDRIAVM
YHGRIVATLP AASATREELG LLMAGVQPVG ALRESTTDGY GEVNVQR
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