| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1620 |
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| Symbol | |
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| ID | 5539096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2093683 |
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| End bp | 2094696 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893757 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001431730 |
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| Protein GI | 156741601 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.822074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTCA AACATGCCAT CGCCGCAGTT CTGGTCGTGC TGTCGCTTGC CGCGTGCGGC
GCCGGATCGC AGACCGTTGC CAGGGTCGAT AATGTGACCC TCACGCGCCA GGAGCTTGAT
CAGCGGATCG ATCGTATTGA GAAAGGGCTT CAGCAGCAGG CGGGGACGGG GTTTCCATTG
CCATCGCGCC TCGATATTGA ACAAGAACTG GTCTCGCAAT TCATTGATCA GCAGTTGACC
CTTGGGTTGG CGCGGCAGCG CGGCATTACC GTCAGCGACG CCGATGTGAA CGAGCAGATC
GAGCGTTTCC GCCAGCAGAT TCAGACGGGA AGCGGCATAT CGCTCGAACA AGCCATCCAG
GAGCAGCTCG GCCTGCCGGG TGAGTCATCG CCGGAGTTTC GCCTGTTCGT GACGTATTTC
CTGGCGCGCC AGAAACTTGG CGAGACGCTG GTCTCCGAAG TGGACATCCG GCAGCGCATC
TCCGACGAAG TGATGGCGGA TACGCAGCGC ATGGTCGATG TGGCGACAGT GGCGCATATT
CTGGTGGCAA CGGAAGACGA GGCGAAGCAG GTGATTGAGC GCCTCGACAA GGGCGAGGAT
TTTGCCGATC TGGCAAAGGA ACTGTCGCAG GACCCCGGTT CGGCGGAAAA TGGCGGTGTC
TACGAGAATA TCCAGCGTGG GCAGTTCGTT CCCGAATTCG ATAAAGCCAT GTTCGAGGAT
TTGCAGCCGG GTGAAACGAC GAAGACACCG GTGCAGACGC AGTTTGGCTG GCATGTGATC
CGTCTGGTGT CACGCGGGGA GGCGCCAGCG CTCGATCCTG CCAACGCGCC GGCGGTCATC
GAGCAGCGGG TGGCGCAGGA ACTGCCCTTC GAGCAGCAGA GCGCGCTCGA ACGTCTGTTG
CAGAGTGAAA AACAGAAAGC GATCCAGGAG CAGCGTCTGG TCGAGCCGAC CTTCCCGACG
CCAACACCCG AACCGTTGCC GACGATTGCT CCGTTACCGA CTCCAGCGCC ATGA
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| Protein sequence | MNLKHAIAAV LVVLSLAACG AGSQTVARVD NVTLTRQELD QRIDRIEKGL QQQAGTGFPL
PSRLDIEQEL VSQFIDQQLT LGLARQRGIT VSDADVNEQI ERFRQQIQTG SGISLEQAIQ
EQLGLPGESS PEFRLFVTYF LARQKLGETL VSEVDIRQRI SDEVMADTQR MVDVATVAHI
LVATEDEAKQ VIERLDKGED FADLAKELSQ DPGSAENGGV YENIQRGQFV PEFDKAMFED
LQPGETTKTP VQTQFGWHVI RLVSRGEAPA LDPANAPAVI EQRVAQELPF EQQSALERLL
QSEKQKAIQE QRLVEPTFPT PTPEPLPTIA PLPTPAP
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