| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1593 |
|---|
| Symbol | |
|---|
| ID | 5539069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 2047943 |
|---|
| End bp | 2048689 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640893731 |
|---|
| Product | silent information regulator protein Sir2 |
|---|
| Protein accession | YP_001431704 |
|---|
| Protein GI | 156741575 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTC CCGACTCATT GATCGAACGG ATGCGCACTG CGCGCCGTGT GGCCGTGCTG
ACCGGCGCTG GCGTTTCCGC CGAAAGCGGT GTGCCGACCT TTCGCGATGC GCAAACCGGC
TTGTGGGCGC GCTACGATCC GGCGGAACTG GCATCACCCG ACGCATTCCG CGCCAATCCG
AATCTGGTAT GGCAGTGGTA CGCCTATCGT CGCGCGCTGG TCGAAGCCGC AGCGCCGAAC
CCAGGGCACC TGGCGCTTGC CGACCTGGAG CGCCGGATTG AGGATTTTAC GCTCATCACT
CAGAACGTCG ATGGACTTCA TCGCCGCGCT GGAAGTCAAA ACGTGGTAGA ATTGCATGGG
AACCTGTTCC GGTATCGCTG CTTTCACTGT GCTGCGCCGG TTGAACTGAC GATTGCGCCC
CAGGACGCGC CTCCGCCTTG TCCGCGGTGC GGCGGGTTGG TCCGCCCTGA CGTGGTCTGG
TTTGGCGAAT GGCTGCCGTC GCAGGCATGG CAAACCGCCG TGGCGGCAGC CGAACGGTGT
GAACTCTTCC TCTGTATCGG CACGTCGGGA GTCGTGCGTC CGGCTGCCGA TCTACCCTTA
ATTGCGCGAT CTTCTGGCGC ATATGCGGTG GAAATCAACA TCGCTCCCGG TGCGCTCGAT
GACCGGTTGG ATCTACATCT GTATGCGCCG TCGGGTCAAT TGCTTCCTGC ACTGATGACT
GCCGCCTTCG GTGACGCGGC GCGGTGA
|
|---|
| Protein sequence | MQIPDSLIER MRTARRVAVL TGAGVSAESG VPTFRDAQTG LWARYDPAEL ASPDAFRANP
NLVWQWYAYR RALVEAAAPN PGHLALADLE RRIEDFTLIT QNVDGLHRRA GSQNVVELHG
NLFRYRCFHC AAPVELTIAP QDAPPPCPRC GGLVRPDVVW FGEWLPSQAW QTAVAAAERC
ELFLCIGTSG VVRPAADLPL IARSSGAYAV EINIAPGALD DRLDLHLYAP SGQLLPALMT
AAFGDAAR
|
|---|
| |