| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1557 |
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| Symbol | |
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| ID | 5539033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1998236 |
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| End bp | 1999981 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893695 |
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| Product | acetolactate synthase, large subunit, biosynthetic type |
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| Protein accession | YP_001431668 |
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| Protein GI | 156741539 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA AGCGCACCGG CGCCCAGGTG ATGTGCGAGG CGCTGATCCG CAACGGGGTC
GAAGTGATGT TCGGCATCCC CGGCGGCGCA ATTATGCCGT TCTACTATGC GATGTGGGAG
TACCGCGACA AACTGCGCCA CGTGCTTTGC CGCCACGAAC AGGGCGCAGG GCACGCCGCC
GAAGGGTATG CGCGCGCCAC CGGTCGGTTG GGAGTGTGTA TCGGCACGAG CGGACCCGGC
GCGACCAACC TGGTGACAGC CATTGCCGAC GCGATGATGG ACAGCACGCC AATTCTGGCG
ATCACCGGAC AGGTCGGCTC TCACGTGCTC GGTAAGGATG CGTTCCAGGA GACCGACATC
ACCGGCATCA CGATGCCGAT CACCAAGCAT AACTATCTGG TGAAACGCGC TGAAGACCTG
CCCTACGTCT TCGAGGAGGC GATCTACATT GCGACCACCG GGCGACCGGG ACCGGTGCTG
ATCGATGTGA CGAAGGACGC GCAACAGGCT ACGATCGTTC CCAACTGGGA CATCAAACTC
GACCTTCCCG GCTACAAGCC CAACTATCGC CCCAATCTCA AGCAGGTCCG TGAGGCGATC
AAACTGATCC TGAGCGCAAA GAAGCCGCTA ATCATTGCCG GTCATGGCAT CATTATGTCC
GGCGCAGTCG AGGAACTGCG CGCTTTCGCC GAGCGCACCC GCATCCCGGT GATCACGACG
CTCCACGGGA TTGGCGCCTT CCCCGAAGAC CATCCACTCA GCATCGGCAT GCCGGGTATG
CACGGCTGGG TGCATGTCAA TCGCGCCATT CAGGAGTGCG ATGTGCTCTT CAATATCGGC
GGGCGCTTCG ATGACCGCGT GACCGGCAAA GCCAGCACGT TTGCGCCAAA TGCGAAGGTT
ATTCACGTCG ATATCGATCC TTCGGAGATC GGCAAGAATG TCAAAGTGAC GGTGCCAATC
GTCGCCGATG CGCGCCTGGC ATTGCAGGCG TTCCTCGATG AGTTCCCGCC TGACCGTGAG
GCGTTCGCTG AATTGCACGG GCATGCGTCC GACTGGATGG AGCACATTCG TGAGATGCAG
GCGAAGCATC AACCGAAGCA GCAATATCTT AACCGCTCGG ATACTGCGAA CATGAGCCTG
CCGCCGCACG ATGTGTATGC AGCGCTCACA AAGGCGCTCA ACAGCCGTGG CAACTACCGC
GTTGTCACCG ATGTCGGACA GCATCAGATG TGGGCGGCGC AACTGATCGA CTGGTATCGC
CCGCGCACTC ACATCACGTC GGGCGGCGCA GGAACCATGG GCTTCGCCGT GCCGGCGGCG
CTTGGCGTTG CGATTGCCCA TCCGAACGAT ACCGTGTGGG CGATCTGCGG CGATGGCGGC
TTCCAGATGA CCAATCAGGA GATGGCGACT ATCGTGCAGG AAGGTATCAA GAATGTCAAG
ATTGCGGTAA TCAACAATGG CTACCTGGGC ATGGTGCGCC AGTGGCAGGA ACTGTTCGAG
AATAAGCGCT ACAGCGGTAC GCCCCTCTCT GGTCCCGATT TCGCCAGGCT TGCGGAGGCG
TACTACTGGA AAGGCATTAC CGTCGAACAC ACCGGTCAGG TCGAAGCGGC TATCGAGGAA
GCCTACGCAA CCGATGGACC GGTGCTCATC GACTTCCGCG TCGAGCGCGA GGTCAATGTG
TTCCCAATGG TGCCACAGAA CAAGAGCATC GGCGAAATGA TCCTGGAGTC GCCCCACCAG
TCATAG
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| Protein sequence | MSEKRTGAQV MCEALIRNGV EVMFGIPGGA IMPFYYAMWE YRDKLRHVLC RHEQGAGHAA
EGYARATGRL GVCIGTSGPG ATNLVTAIAD AMMDSTPILA ITGQVGSHVL GKDAFQETDI
TGITMPITKH NYLVKRAEDL PYVFEEAIYI ATTGRPGPVL IDVTKDAQQA TIVPNWDIKL
DLPGYKPNYR PNLKQVREAI KLILSAKKPL IIAGHGIIMS GAVEELRAFA ERTRIPVITT
LHGIGAFPED HPLSIGMPGM HGWVHVNRAI QECDVLFNIG GRFDDRVTGK ASTFAPNAKV
IHVDIDPSEI GKNVKVTVPI VADARLALQA FLDEFPPDRE AFAELHGHAS DWMEHIREMQ
AKHQPKQQYL NRSDTANMSL PPHDVYAALT KALNSRGNYR VVTDVGQHQM WAAQLIDWYR
PRTHITSGGA GTMGFAVPAA LGVAIAHPND TVWAICGDGG FQMTNQEMAT IVQEGIKNVK
IAVINNGYLG MVRQWQELFE NKRYSGTPLS GPDFARLAEA YYWKGITVEH TGQVEAAIEE
AYATDGPVLI DFRVEREVNV FPMVPQNKSI GEMILESPHQ S
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