| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1508 |
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| Symbol | |
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| ID | 5538984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1925343 |
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| End bp | 1926038 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893646 |
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| Product | peptidase membrane zinc metallopeptidase putative |
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| Protein accession | YP_001431619 |
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| Protein GI | 156741490 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2738] Predicted Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.703268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.326694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTCA GTCCTCTGTA CCTGATTGTC ATGCTGCTGG GCGCCGGCAT CACGTTATGG
GCGCAGTGGA AGGTGCAGTC TGCCTACAAG AAGTATGCGC AGGTGCGCAA TGCGCGTAAT
ATGACCGGTC TCGATGTGGC GCGCGTCCTG ATGCGCAATG AAGGTCTCGA CGATGTGCGT
GTCGAACAGA TCGGCGGTGA ATTGACCGAT CACTACGATC CGCGCGCGAA GGTGATGCGT
CTTTCCGCCG GTTCAATTGC CCATCCGTCG GTGGCAGCGA TGGCCATTGT TGCGCATGAG
TTGGGGCACG CATTGCAGGA CCGACAGGGA TACGCCTGGT TGCGGTTGCG CTCCGGGATC
GTCGGTATTG TGAATGTCGG TTCGCAACTC GGCGGTATTC TCCTGATGGT CGGACTGGTG
CTCGGCGCTT TTTCGCGCGC AGGTCTGGCG CTTGCCTGGA TCGGCGTGCT GCTGATGAGC
GGCGGTGCGA TATTCAGTCT GGTCACGCTG CCGGTCGAGT TCGACGCCAG CGCGCGCGCA
CGCGCCATGC TCGAACGGTA TGGTCTGGTC ACGCGCCAGG AAGCCGAAGG GGTCAAAGCA
GTGCTCGATG CCGCAGCGCT GACCTATGTC GCCGCCGCAG CGACCGCTAT CCTGCAAATG
TTGTATTATG TCTCCCTTCT GATGCGGCGA CGATAG
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| Protein sequence | MFFSPLYLIV MLLGAGITLW AQWKVQSAYK KYAQVRNARN MTGLDVARVL MRNEGLDDVR
VEQIGGELTD HYDPRAKVMR LSAGSIAHPS VAAMAIVAHE LGHALQDRQG YAWLRLRSGI
VGIVNVGSQL GGILLMVGLV LGAFSRAGLA LAWIGVLLMS GGAIFSLVTL PVEFDASARA
RAMLERYGLV TRQEAEGVKA VLDAAALTYV AAAATAILQM LYYVSLLMRR R
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