| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1476 |
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| Symbol | |
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| ID | 5538951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1884995 |
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| End bp | 1885654 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893614 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_001431588 |
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| Protein GI | 156741459 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.219391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.220131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATCT GGCAATCAAA CCATCGCGTC GACTGGACCG CGCCGCGGAT TGAGTCGCTC
ATCCCGATGG TGGTCGAAAG CACTAATCGT GGCGAACGCG CTTACGATAT TTACTCGCGA
TTGCTGAAAG AGCGCGTGAT TCTGCTAGGC ACACCAATCG AGGATCAGAT CGCCAACCTG
ATCGTCGCGC AGTTGCTGTT CCTTGAGCAC GAAGACCCGG ACCGCGACAT CTGGCTCTAT
ATCAATAGCC CCGGCGGTTC GATCACGGCC GGTCTGGCAA TCTACGACAC TATGCAGGTC
ATTCGTCCCG ATGTGGCGAC TGTTTGCGTC GGTATGGCAG GCAGCATGGC GACGCCGATT
CTTGCGGGCG GCGCCAAAGG CAAGCGCTAT AGCCTGCCGC ACTCGACCAT TCATATGCAC
CCGGCGGGTG GCGGCGCGCG CGGCTATGCG CCCGACGTCG AGATCATGGC GCGCGAATTG
CTGCGCGAGC AGCAGTTGAT CCGTGAATTG CTGGCGAAGG ATACCGGTCA ACCGCTCGAA
CGCATTGCGC GCGACTTCGA CCGCGACTTG TTCATGGATC CGCAGCAGGC GAAAGAGTAT
GGTATCATCG ACGAAATTCT GACCCGCGAA GATCTGCCGG CTGCCAGCGA GCGCCGTTGA
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| Protein sequence | MGIWQSNHRV DWTAPRIESL IPMVVESTNR GERAYDIYSR LLKERVILLG TPIEDQIANL
IVAQLLFLEH EDPDRDIWLY INSPGGSITA GLAIYDTMQV IRPDVATVCV GMAGSMATPI
LAGGAKGKRY SLPHSTIHMH PAGGGARGYA PDVEIMAREL LREQQLIREL LAKDTGQPLE
RIARDFDRDL FMDPQQAKEY GIIDEILTRE DLPAASERR
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