Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1451 |
Symbol | |
ID | 5538925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1852864 |
End bp | 1853697 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893589 |
Product | hypothetical protein |
Protein accession | YP_001431564 |
Protein GI | 156741435 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.963117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCGAC CCGACGAAGA TGAGCGCCTG ACAGCGGCAA TGGCGCACGC CAGTATGATA GCGAATGCGA CCGGTTTGAC CGGACTGGTG CTGACCGTCG TGCTTTGGGC GACGCAGCGC CGGAGATCGC GTTTTGTGCG CGCGCATATC GTGCAGGCGC TCGTCTATCA GGCAGGCACG CTTTTGGGAG TCGTGCTGCT AATGCTCTTG TGGTCCGGGT GCCTGGTGCT CTCGTTGCTG CCTGCCGCGC TGCGACCAGA CCTCTACCGT GATGGTACGT TGCCAGATAC GTTCTGGATT GCGTTGTTCG GTCTGATCGT TCCCATTGTG TATGGATTTG CTGCGACCCT GTATGCACTC TACGGGGCAT ACCAGGTCTA TCGCGGCAAC CGATTCGCCT ATCCGCTCGC CGGACGCCTC GTGGCGCGTG ATCTGGAAGC GGCGTCATCT GACGCACCCG TATCAGCAAC ACTCCAATCA GGTACACCGT CGCTCCCTTC GCCTGGCAGC CCGCTTGTCG CGCAACCATC GACGCCTGCA CCTCCAACTA CGCCACAGGC GCGCGTCGTG GAAGAATCGG CGAAGCCGGA CACATCAGCG GCGCCGGCCA CGGCTGCCGC GCCTCCTTCG TCCTCCGAAG CGGCCACAAC AGTCGGCAGC GCGGGGAGCG CACCATCATC CACCGATAGT GCGCCACCTG TTTCTGGCGC CCATGAGGTT GCAGAAGTTA AGCCAGTGCA GGACGCGCTC GACCAGGGTT CACGGTTGCC CGACAGAGTC GCCGCTTCAC CTGCCGACGC CCCATCGACC GGTCAGGCGC CGGACGAACG GTAG
|
Protein sequence | MARPDEDERL TAAMAHASMI ANATGLTGLV LTVVLWATQR RRSRFVRAHI VQALVYQAGT LLGVVLLMLL WSGCLVLSLL PAALRPDLYR DGTLPDTFWI ALFGLIVPIV YGFAATLYAL YGAYQVYRGN RFAYPLAGRL VARDLEAASS DAPVSATLQS GTPSLPSPGS PLVAQPSTPA PPTTPQARVV EESAKPDTSA APATAAAPPS SSEAATTVGS AGSAPSSTDS APPVSGAHEV AEVKPVQDAL DQGSRLPDRV AASPADAPST GQAPDER
|
| |