| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1450 |
|---|
| Symbol | |
|---|
| ID | 5538924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1852364 |
|---|
| End bp | 1852885 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640893588 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_001431563 |
|---|
| Protein GI | 156741434 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.292844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CATTCACCTT CCCCGACATC ACCGACCGGC TCGACATCCA TCCAACCGCG
TATATTTCGC CATATGCATA TGTACACGGC ACGGTCAGCA TTGGCGCCGA CTCGTCGGTG
TGGCCTATGG TCGTCATTCG TGGCGATAAT GGATTCATTC GTATCGGTGC GCGGTGTAAT
ATCCAGGATG GCAGCGTGCT CCATGCCGAC CCAGACGCCC GGCTGACGAT TGGCGACGGT
GTGAGCATCG GGCATGCAGC CGTTGTTCAT GGCTGCACCG TCGAGGATGA TGTGCTGATC
GGGATCGGTG CGGTGGTGCT GAATCATGCG CAGATCGGCG CCGGTAGCCT GATCGCAGCG
CGCGCCCTGG TGACCGAGGG CATGATCGTT CCACCAGGGT CGCTGGTGAT GGGCATACCC
GGTGTTATTC GCCCGCTCGG CGAAGGGCGT CTCGAACGGA TCCGCCGAAC GGCGCAACGC
TACGTGGCGC TGAAGGAGCG CTACCGTTCG TCCGGCGCCT GA
|
|---|
| Protein sequence | MTEPFTFPDI TDRLDIHPTA YISPYAYVHG TVSIGADSSV WPMVVIRGDN GFIRIGARCN
IQDGSVLHAD PDARLTIGDG VSIGHAAVVH GCTVEDDVLI GIGAVVLNHA QIGAGSLIAA
RALVTEGMIV PPGSLVMGIP GVIRPLGEGR LERIRRTAQR YVALKERYRS SGA
|
|---|
| |