| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1437 |
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| Symbol | |
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| ID | 5538910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1830533 |
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| End bp | 1831240 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893574 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001431550 |
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| Protein GI | 156741421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.418693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTGC TTGAGGGGGT GCGCCTGGTC GCCGATGCGC TGGAGAGTGG CGCGACGCTG
ACGCTTGTGC TGTATGCGCC GGAACAATTG CAGCAGACGC CTGCCGGGTT GGATTTGTTG
CAACGGCTTC AACGCCTGCC TGTCGGTTAT GCGGCGACGC CGCAGGTGAT TGCGTCAGTC
GCCGATACCG TCCATCCGCA AGGAGTCGTG GCGCTTGCCC GATGGCCGCA AATCCCGCCA
GGGAAACCTG GTCTGATTCT GGTGATCGAT GCCGTGCAGG ATCCCGGTAA CTTGGGAACG
CTCCTGCGCA GCGCTGAGGC TGTCGGCGTG GCGCAGACGC TCTGTAGCGT CGGTACGGTC
GATGTCTATG CGCCGAAAGT GGTGCGTAGC GCGATGGGGG CGCACATTCG CCTGTCCATC
GAGCAGGACG TCCGCTGGGA TGAGATCGGC GAGCGTCTGG CAGATGTTGA TCATGTCTAT
GCCGCCGATC CACATGCGCG CATGCCGTAC TATGCCGCCG ACTGGCGCCA ACCGTCGGCG
CTGCTGGTCG GGAATGAGGC GCACGGTTTG AGTGAGGCTG CGCGTCGGCT TGCTACCAAA
CCGATCACCA TCCCCATGTG CGGGAGAGCC GAGTCGCTCA ATGTCGCGGT GGCGGCAAGC
GTGATCCTGT TCGAGGCGCT GCGGCAGCGC ACGCTGGGAC GTGGTTAA
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| Protein sequence | MFVLEGVRLV ADALESGATL TLVLYAPEQL QQTPAGLDLL QRLQRLPVGY AATPQVIASV
ADTVHPQGVV ALARWPQIPP GKPGLILVID AVQDPGNLGT LLRSAEAVGV AQTLCSVGTV
DVYAPKVVRS AMGAHIRLSI EQDVRWDEIG ERLADVDHVY AADPHARMPY YAADWRQPSA
LLVGNEAHGL SEAARRLATK PITIPMCGRA ESLNVAVAAS VILFEALRQR TLGRG
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