| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1319 |
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| Symbol | |
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| ID | 5538791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1697904 |
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| End bp | 1700693 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893456 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001431433 |
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| Protein GI | 156741304 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0611903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGACC ACTCGCTCGA TCAGATTGCG GCAATGTCGC CGCTTGAGGT CTGCGCCGCG
TTGCAGACTG CACCACACGG CCTCGACGAA GCAGAGGCGC GGAGACGCCG TGAACGCTAC
GGTCCCAATG CGATTGCCGA TACCCTGCCG GTCTCGACAC TTCGCCGCCT GATCGCGGCC
TTCGCCAACT GGATTTCGCT GATCCTCTTG ATCGCCGGTC TCCTGGCATT CCTCAGCGAT
ACGCCTATTA TCGGGTGGAT CATCCTGGTT GTTGCCCTCC TTAATGGCGT GTTCACCGCC
TGGCAGGAGT ATCTTGCCGA ACGCGCCATC GCCGCGCTGC GCCAGTTGTT GCCCGCAACC
GCCTATGTGC GTCGCGCCGG TCAGGTGCGT CAGATACCGA CAACCGAGGT CGTTCCTGGA
GATGTTCTGC CGCTGAAACC GGGCACGGTC GTTGTGGCGG ACGGCTACCT GATCTCCAGT
GATGGGTTGC GTGTCAAGCA GACTGCGCTG ACCGGCAATG CTGCGCCAGT GACCAAAGTG
GCCGGCGCGA TGCCCGATCC GACGCTGGCG CTGGTCGAAC GTCCCAACAT TCTGCTGGCG
GGCACGGTTG TGTTCGAAGG ACAGGGCAGC CTGGTCGTTG TGCATACTGG GATGCAGACC
CTGCTGGGCA CGATTGCCGA AAGCACCGCA GCGCTTCGCG CCGAACCAAG TCCGCTGGGG
CAGGCATTGA ACGCGCTCGC CGCCACGATC ACCCGTGTGG CGATTGTCGC CGGGATTGGC
GCGTTTCTGT TGACGGTTGT AGGACAGCAA TTTTCCGTTC AGGCTGGCAT CATTTTTGCC
ATCGGCATGA TCGTGGCATT CGTGCCAGAA GGGTTGCTGC CAACGGTCAC GCTGGCGCTG
GCGCTGGCGC GGCGACGCCT GGCGCGTTAT GGCGTGCTGG TGCGTCGGCT GGCGGGGGTC
GAAAGCCTGA GTTCGGCGAC GGTGCTGTGC CTTGATCGGG TTGAGACGTT GACCGGCAGT
GCCCTGACGG TCAACGCTAT CTGGGCAGGC GGACGAGTTT ATACCGCCAC CGGCAGCGGT
TATCGACCGG AAGGTGCATT TCTGCACGAA CGCGCACTGG TGCGGGTTTC GTCGAACCCC
GATCTGACTG CCGTGCTGCA CGCGGCGGTG TTGTGCAACA ATTCGCGTCT GCTGCCGCCC
GACGCCAGCA ACCCCGATTG GCACATTGTC GGCGATCCCC TGGAAGGCGC CCTGTTGGCG
ACCGCAGCGC GCGGCGGCAT TAATGACGCA TCGATTGGCA ATCACGTGGT GCGGTTGCAG
AGTTTCCCCC ACGAGCCGCG CCGTCAACTC GGCAGTGTGG TGGTGACGAT TGAGCGCAAT
GGGAAGCGTG AACTGGCTGC CTATGTGCGC GGCGCCGGAC GCGTCGTTCT CTCCCTCTGC
GTCGCCATCC AGCGGCGCGG GATGGCGACG GCGCTGGATG AAGCGACGCG CCAGGAAATC
GAGCAGATCA TCGATGATCA CGCCCGAACC GGCCAACGAG TGGTCGCCTT CGCAATGCGC
ACACTCGAAG AGCCACAGGA AGGGATGATG TGGCGCGCGC GCGATATCGA ACACGATCTG
ACGTTTCTCG GTTTTGCGGC GCTCCAGGAG CCGCCCCAAC CAGAAGTCGT CCGGTTGATC
GAAGGATGTC ATAAGGCAGG AATCCGGGTG ATTGTCGTCA CCGGTGCGTA TGGACTGGCT
GCCGAAGCAG CGGCACGGCG GGTAGGGTTG ATCGATACAC CGCACGTCCA CATCGTCACC
GGCGCCGATC TCGACGATAT GAGCAGCGCC AATCTTGGGC TGCTGCTCGC ACCGCTGGAA
GATGTGATAT TTGCGCAAAT GGATGCGGTG CATAAACGGC GGATCGTCGA AGCATTGCAG
CAACGCGGCG AGGTGGTAGC GTTTTTGGGA GATAGCATCA ACGATGCGCC GGCGCTACGG
CAGGCGGAAA TTGGCGTGGT CGTCAGCGCA TCGGGAACGG CAGTCGCGCT TGCCGCCGCC
GACATTGTGC TCAACGCACA ACATCCCGCC GGTCTGCTCC TGGCGATCGA GGAAGGGCGC
GCGATTTTCG CCAACATCCA GAAACTCGCT GCCTACATTT TTGCGCACAA TGTCGCCGAA
GCCGCAGTGA TCGTCGTGAG CGTCGTCGCC GGCATTCCAT TGCCGCTGAC GGTGTTGCAG
GTGCTGGCGA TCGACGTGGG AACGGAACTG CTTCCCTCGG TGGCGTTGAG CGCCGAGCCT
CCCGAACCCG GCATTCTGGA ACATCCGCCG CGTCCGCGCA CGGCGCCGCT GCTCGACCGT
GAAACATTGC TGCGGACGTT TGCGATGCTG GGAATGCTGG AAGGTATGCT GGCGCTGCTG
GCGTTCTTCG CGGTGTACTG GAGCGCCGGG TGGCGGCCAG GCATGCCGAT GGATAACAGT
GGCGACCTCT ACGCGCAGGC GACGACCCTG ACCTATATGG CAATCGTTAT GGCGCAGGTC
GGGGTGGCAT TCGCCAGCCG AACGCGCCGG AGTTCGGTCT TTCACATTGG TCTCTTCACC
AACCGGGCGT TGGTGATCGG AACGCTGCTC TCGGTGGTTC TGATGCTGGC GCTGGTTTAT
GTCGAACCGC TGGCGACACT TTTCAACTTT GTGCCGCCGC CGCCCGAACT CTGGCTCATG
CTGATCTCCT TCCCGGCAAT TATGTTGCTG GTGGACGAAA TCTTCAAGTG GTGGCGGCGA
CGCCACCAGA CGGTCCGGTT TGCCTTTTGA
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| Protein sequence | MSDHSLDQIA AMSPLEVCAA LQTAPHGLDE AEARRRRERY GPNAIADTLP VSTLRRLIAA
FANWISLILL IAGLLAFLSD TPIIGWIILV VALLNGVFTA WQEYLAERAI AALRQLLPAT
AYVRRAGQVR QIPTTEVVPG DVLPLKPGTV VVADGYLISS DGLRVKQTAL TGNAAPVTKV
AGAMPDPTLA LVERPNILLA GTVVFEGQGS LVVVHTGMQT LLGTIAESTA ALRAEPSPLG
QALNALAATI TRVAIVAGIG AFLLTVVGQQ FSVQAGIIFA IGMIVAFVPE GLLPTVTLAL
ALARRRLARY GVLVRRLAGV ESLSSATVLC LDRVETLTGS ALTVNAIWAG GRVYTATGSG
YRPEGAFLHE RALVRVSSNP DLTAVLHAAV LCNNSRLLPP DASNPDWHIV GDPLEGALLA
TAARGGINDA SIGNHVVRLQ SFPHEPRRQL GSVVVTIERN GKRELAAYVR GAGRVVLSLC
VAIQRRGMAT ALDEATRQEI EQIIDDHART GQRVVAFAMR TLEEPQEGMM WRARDIEHDL
TFLGFAALQE PPQPEVVRLI EGCHKAGIRV IVVTGAYGLA AEAAARRVGL IDTPHVHIVT
GADLDDMSSA NLGLLLAPLE DVIFAQMDAV HKRRIVEALQ QRGEVVAFLG DSINDAPALR
QAEIGVVVSA SGTAVALAAA DIVLNAQHPA GLLLAIEEGR AIFANIQKLA AYIFAHNVAE
AAVIVVSVVA GIPLPLTVLQ VLAIDVGTEL LPSVALSAEP PEPGILEHPP RPRTAPLLDR
ETLLRTFAML GMLEGMLALL AFFAVYWSAG WRPGMPMDNS GDLYAQATTL TYMAIVMAQV
GVAFASRTRR SSVFHIGLFT NRALVIGTLL SVVLMLALVY VEPLATLFNF VPPPPELWLM
LISFPAIMLL VDEIFKWWRR RHQTVRFAF
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