Gene Rcas_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1262 
Symbol 
ID5538734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1632662 
End bp1633360 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID640893400 
Productmethyltransferase type 11 
Protein accessionYP_001431377 
Protein GI156741248 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.978798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGA AATGCAATCC TCCGGCAACC GGTCTGGTGC TCGAGATCGG CAGCGGCGAT 
AATCCGCATC CGCGCGCCAA TATTCTGCTC GACCGCTACC CCGGCGCCGA TAATCGCGAA
CGCGGTGGCG ATCTGGTCGT TGATCGTCCA TTCGTGGTAG CGGATGCGCA TTATCTCCCC
TTCAAGGATG GCGCGTTTGC GTATACGATC TGCTCGCACA TTCTAGAGCA CATGGATGAC
CCGCTTCAGT TCGCCGCCGA ACTCCGACGG GTGAGCGCAG CCGGGTACAT TCAGAGTCCG
TCCGAGATCG CTGAACGCCT GTTTCACTGG TCGTTCCATC GCTGGTATGT CAATCTGGAA
GGCGAAACGC TGGTGCTTCA TCCGCGCGAA CCGGCCGAGC CGTTCGGTGA GTTGTTCGAT
TATTTGTACG CCTACAACCC CGCATACTAT TTCTTCCAGC GCAGCATGCC CGATCTCTTT
TGGGTCGAAC GCGAATGGCA TGGCGACAAT CTGAACATCG AGGTGCGCGA CTCGTCGCCG
CTTCGCCTGC GCGATCCCGC GTTTCTGCGC GACCTGGTGC GCCCGCAGAT GTCGTTGTTC
CAGTTGATTG GACTGTTCAT TGCATCGCTC GTTGCGCGCG CGCTCGACGC CAATGTGCGT
CGCCAGATTC GACGCTTGCT GCGGCGGAGT TATGTGTGA
 
Protein sequence
MRQKCNPPAT GLVLEIGSGD NPHPRANILL DRYPGADNRE RGGDLVVDRP FVVADAHYLP 
FKDGAFAYTI CSHILEHMDD PLQFAAELRR VSAAGYIQSP SEIAERLFHW SFHRWYVNLE
GETLVLHPRE PAEPFGELFD YLYAYNPAYY FFQRSMPDLF WVEREWHGDN LNIEVRDSSP
LRLRDPAFLR DLVRPQMSLF QLIGLFIASL VARALDANVR RQIRRLLRRS YV