Gene Rcas_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1213 
SymbolglpX 
ID5538679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1567225 
End bp1568214 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID640893345 
Productfructose 1,6-bisphosphatase II 
Protein accessionYP_001431328 
Protein GI156741199 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1494] Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 
TIGRFAM ID[TIGR00330] fructose-1,6-bisphosphatase, class II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.393522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCG AACGAAATCT GGGAATGGAC CTGGTACGCT GCACCGAAGC GGCGGCGTTA 
CGCGCCGCCC GCCTCATGGG TCGTGGTGAC AAACATGCCG CCGATCAGGC GGCCGTTGAT
GCGATGCGTT TTGCGCTCGA CGCGGTGCCG ATGGATGGTG TGGTGGTCAT TGGCGAAGGA
GAAAAGGACG AAGCGCCGAT GCTGTATATT GGCGAGAAGG TCGGCTCCGG CGAACCGCCG
GAAGTTGATG TGGCCGTCGA TCCGGTCGAA GGCACAACGC TGCTCGCCGA AGGTATGCCA
GGCGCGATTG CCGTAGTTGC GCTTGCAGAG CGTGGTTCAC TCTATCACTG GACGGGCATC
GCCTACATGG ACAAACTGGC GGTCGGACCG CAGGCGCGTG GCGCGATTGA CATCAACGCG
CCGGTTGATG AGAACATCCG CAATGTCGCG CGGGCGCTCA AGAAAGAAGT CGAGGATATT
ACGGTGGTGG TGCTTGATCG ACCGCGCCAC AAGGAACTCA TCCGTCAGAT CCGCGAGACA
GGAGCGCGCA TCAAACTCAT TCTCCATGGC GATGTCTCCG CAGGAATCAT GACGGCTATC
GAAGACCCGC CGGCGGATAT GCTGATGGGG ATCGGCGGCG CTCCCGAAGC CGTTATCACG
GCATGTGCGA TGAAATGCGT CGGCGGCGAG ATTCAGTGCA AACTCTGGCC CCGAAACGAC
GACGAACGCG CCCTGGCAGC CGCTAATGGC ATCGATCTCG AGCGCGTCTA TCGCACGTCC
GATCTGGTGC GCGGCGAGAA TGTCTTCTTT GCCGCCACCG GCATCACCGA CGGCGAGTTC
CTGCGCGGGG TGCGCTATTT CAGCGGCGGC GCCCGCACCT ACTCGGTTGT GATGCGTTCT
ATTTCGGGCA CGGTGCGCTA TATCGAGTCG CGCCACGACT GGACGAAACT GATGCGCATT
TCCGGTGTTG ATTATGTCCA TGCCCGCTAG
 
Protein sequence
MRLERNLGMD LVRCTEAAAL RAARLMGRGD KHAADQAAVD AMRFALDAVP MDGVVVIGEG 
EKDEAPMLYI GEKVGSGEPP EVDVAVDPVE GTTLLAEGMP GAIAVVALAE RGSLYHWTGI
AYMDKLAVGP QARGAIDINA PVDENIRNVA RALKKEVEDI TVVVLDRPRH KELIRQIRET
GARIKLILHG DVSAGIMTAI EDPPADMLMG IGGAPEAVIT ACAMKCVGGE IQCKLWPRND
DERALAAANG IDLERVYRTS DLVRGENVFF AATGITDGEF LRGVRYFSGG ARTYSVVMRS
ISGTVRYIES RHDWTKLMRI SGVDYVHAR