Gene Rcas_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1129 
Symbol 
ID5538595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1463760 
End bp1464761 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID640893263 
Productphosphoesterase domain-containing protein 
Protein accessionYP_001431246 
Protein GI156741117 
COG category[R] General function prediction only 
COG ID[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCA ACGATCCCGC CACGGTAGCA GCGCCGCTTA CTGAATACAT TGCCGCTGCA 
CAGCACACGC TCATTCTGAC TCATGTCAAC CCCGATGGCG ACGCCGTCGG CGCTGCTCTT
GCCGTCTGGC ATGTTCTTGG CATATTGGGC AAGCAGCGCA CGGCAATGCT GATGCCGCCG
ATTCCAGTCT ATGCCGCATG GCTCCCCGGC GCCGACCAGA TTGTGCTCTA TCAGTCGGGC
ATGGCGCTGC CGCCTGCCGA CCTTGCCATT CTGGTCGATA CGGCTCACCT GACCCGCATT
GGTCCGATGT ACGATGAACA CGCCGCAATG CTGGCAACGT TGCCTGTGGT CGTCATCGAT
CATCACGTGA CGAATGATGG CGGCGCCTCG CTCAACCTGG TCGATCCCGA TGCCGCATCA
ACGTGCGATC TGCTCTATCG CCTGTTCCGC GCGATGGGTG TGCCGATTGA CCGAACGATT
GCCACATGTC TGTTGCTCGG ATTGACGACC GACACGCAAA GTTTCCAGAC GAACGCCACC
CATCCGGAGT CGCTGCGCGT GGCTGCGGCG CTCCTTGAGT CTGGCGCCGA CCATGCGCGG
ATTATTCGCG CCGTGTACTA CGGGTTGCCT GCAAGCAGTG CAGCGTTGAT GGGTCACGCG
CTTGCCGGTT TGCGCTACGA GGATGGTGTC GTCTGGACGA CGGTCGATAA GCGCATGTTT
GCGGCAACCG GCGCCGAAGA AGAAGCAGCG GATGAGGTCA TACGGGTGTT GCAGCGGATC
GGTGAGGCGC GGGTCATGGC GCTGTTCAAG GAGCGCTCTG ATGGAACGAC AAAGATAAGC
CTCCGGGCGC GCGCGCCGCT GAATGTCGCT GCGATTGCGC AACGCTGGGG CGGCGGTGGG
CATGCGCAGG CGGCAGGGGC AAATCTGTCA ATGACACCTG CCGAAGCTGC GATGGTCGTC
GTTCCTTTGC TCAAGGAATT AGCAGCATCC AACGCGTTGT GA
 
Protein sequence
MISNDPATVA APLTEYIAAA QHTLILTHVN PDGDAVGAAL AVWHVLGILG KQRTAMLMPP 
IPVYAAWLPG ADQIVLYQSG MALPPADLAI LVDTAHLTRI GPMYDEHAAM LATLPVVVID
HHVTNDGGAS LNLVDPDAAS TCDLLYRLFR AMGVPIDRTI ATCLLLGLTT DTQSFQTNAT
HPESLRVAAA LLESGADHAR IIRAVYYGLP ASSAALMGHA LAGLRYEDGV VWTTVDKRMF
AATGAEEEAA DEVIRVLQRI GEARVMALFK ERSDGTTKIS LRARAPLNVA AIAQRWGGGG
HAQAAGANLS MTPAEAAMVV VPLLKELAAS NAL