| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1106 |
|---|
| Symbol | |
|---|
| ID | 5538572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1431882 |
|---|
| End bp | 1432316 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640893240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001431223 |
|---|
| Protein GI | 156741094 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2445] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00999093 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCG AGTTCAGCGG TATCGAGAGG CGTTTGGACG AACTCAGCGA GCGCCTGGCG
CGTCTGACCC CGTTGCGTGA GCGTCCGCGC TCCGATTTTG ACGTCGATCC TTATTTGCGC
GACATAGCCG AGCGTAACCT GGAAGTCGCT GCACAACGCT GCATCGACAT CTGTCATCGG
ATCATTGCGC TGGAAGGCGC GCGAAAACCG CGCGACTACC GTGAAGCGAT TGTGCGTATG
GGAGAGTTAG GCGTTCTACC GCCCGAATTT GCGGCAAACC TGGCGCCGAT TGCCGGTTTT
CGCAACATCC TGATCCATGA GTATCTGCTG ATTGATCGGG ACGAGGTGTA CCGGAATCTG
GCGAACCTCG ACAATCTGGA GCGTTTTGTC ACGCTGATTC GCAACTGGCT GCGTCGGCAG
GGAGAAAAGG GCTGA
|
|---|
| Protein sequence | MSVEFSGIER RLDELSERLA RLTPLRERPR SDFDVDPYLR DIAERNLEVA AQRCIDICHR
IIALEGARKP RDYREAIVRM GELGVLPPEF AANLAPIAGF RNILIHEYLL IDRDEVYRNL
ANLDNLERFV TLIRNWLRRQ GEKG
|
|---|
| |