Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1089 |
Symbol | |
ID | 5538555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1411854 |
End bp | 1412681 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893223 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001431206 |
Protein GI | 156741077 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1589] Cell division septal protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAACG ACTTGCACTA CAACCAGCCC AACACGCGCG CTCGCATCGC AGCGCGGCGC AACCGGCGGC GTAACGCCGT CAGCGCCATG CCGGGTCTGC GTCGCGCCAT CGGCGGCTGG CTGGCATCCG GGCGCATCGC CAGCCTGGTG TTGTTTCTGG CATCGCTCGG CGGGCTGATT GCCATCGCGG TTTCGCCACA GTTCGTGGTG CGCAGGGTTC AGATCAATGG CGCGCAGATA CTCGATACAG CCGACATCGA GGAGATGGCG GGCGTGACCG GCGCCTCGAT CTGGCTGGTG CAGACCGACA ACGTCGAAGC GCGCCTTGCC CAGAATGCAT CTATCGAACG TGTCGAGGCA TCTCTGATAT TACCCGACAT CCTGACGATT AACCTGGCAG AACGCCAGCC CAATGTGCGC TGGCAGGTCG GCGACATACG CTACCTGGTC GATGCCGAAG GGCGGGTGTT GGGTCCTGAC ACTGCCACGT TCGTCACCGA CACCCTGATC GTCGAAGACC GCAGCGGGCG AACGATTGAA CCGAACGACC GGATCGATCC CGATGTGCTT TTGCTGGTTC GTGCGCTGGC GCTCCGTTTG CCGAATGAAG CGGGCGTCAC GCCGGCCACC ATCAGTTGGG ACATCGAGCA CGGCGTCATG GTGACAACCG CCGACGGACG AATGATCGTC TTTGGACGAA AGGAGCGCCT GGACGAGAAG ATCGAGATAC TGCGCTTTCT GACCATCCAG GAGCCAACGG AATATACCTG GCTCGATTTG CGACCGGCGA CGCCGTATTA CCGGAATGAT ACGCCGCCAC AACCGTAG
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Protein sequence | MRNDLHYNQP NTRARIAARR NRRRNAVSAM PGLRRAIGGW LASGRIASLV LFLASLGGLI AIAVSPQFVV RRVQINGAQI LDTADIEEMA GVTGASIWLV QTDNVEARLA QNASIERVEA SLILPDILTI NLAERQPNVR WQVGDIRYLV DAEGRVLGPD TATFVTDTLI VEDRSGRTIE PNDRIDPDVL LLVRALALRL PNEAGVTPAT ISWDIEHGVM VTTADGRMIV FGRKERLDEK IEILRFLTIQ EPTEYTWLDL RPATPYYRND TPPQP
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