| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1026 |
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| Symbol | |
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| ID | 5538492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1338035 |
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| End bp | 1339258 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893165 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001431148 |
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| Protein GI | 156741019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTCGT TTTCTCACCT TTTCTTGCAG CGCCTCGAAC GGTTCGTGAT CGGTTCGTAC
CCGGAATCCG TTCGCGCCAA TGTTCGCATC GAATTGTTCG CCTCATTCTG GTATGGTCTC
TTTTTTGCCG CCAGCCTGAC GTTTTTTCCG GTCATTCTGC GCCGCTTGGG AGCGACCCCC
TTCGATCTTG CGCTGTATGT CATCTTCAGT TATATCGGTC AAACCCTATC GCCCTTGAGT
CTAGCGCTCC TCCAACGCGC GTCGCCGTTG TGTTTTTCGA TCATCGCCTG GTCGTTTGGG
CGCGGGTTGC TCCTGTGTGG CGCGCTGCTC ACCGGAGCGC CCTGGCTGCT GGCGCTTGCG
GCGTTGTTCT GGATCGCCGA GGCGCTGCCG GCGCCAGCCT ATGCGCGCAT CATGCAACAG
ATTTATCCGC CGCGCTACCG GGGGCGGGCA ATGTCTGCCG TGCGAATCGG GGTCGCCATC
GTGGTGCTGG TTGCTACGCC GGTCGCAGGC TGGGCGCTCG ATCAGGTCGG GCATCAGCCG
CTCTTCGCGC TGGCTGCAAT CTTTGGCGTG GTTTCGAGCC TGATTTTCTC ACGGGTTCGC
CCACTCGATG GCGTTGCGGA ACCGGAGAGT CCGCCGACAC TGCGGGAGTT GCTCCCGATC
GTGCGCCGCG ATCGGCGATT TATGCTGTAT CTGATCGTCC TGGTCGTTTA TGGGTTTGGA
GCAGTGATGG CGCTGCCGCT CTACCCGCTG GTACAGGTAA GCCGGCTGCA ACTCTCGTAC
ACCACGATTG GTTATCTGAA TCTGGTGCAG TCGATCTTCT GGTTGGCGGG ATTCTTTGTG
TGGGGGCGGC TGCTGGACCG TTATGGACCG CTGTGGGTGT TGCGCTTGAG CATGCTCCTG
GCAGCCTTTG TGCCGTTCAC GTATGTGTGG GCTGGCAATG CCTGGATGCT CCTGCCGGCG
TTTATCTGTC AGGGATTGAT GCAGGGCGGT TTTGAATTAG GGATTACCAC CGGAGTCATC
GATCTCGCCG AACGCGGTCG CGTGATGGAA TACACGGCGC TGCAAGCAGC GATTATCGGC
GTGCGCGGTA TGCTGGCGCC GCTGCTCGGG TCGCTGCTCC TGGGCATTGG CGCTTCCGAA
GCACTGGTGC TCGGCGCCGC CACCGGGTTG GTGATCGCGT CCTGCGTGTT GCTGGGCGCC
GTGCAACCGC CACGGACCAG TTGA
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| Protein sequence | MQSFSHLFLQ RLERFVIGSY PESVRANVRI ELFASFWYGL FFAASLTFFP VILRRLGATP
FDLALYVIFS YIGQTLSPLS LALLQRASPL CFSIIAWSFG RGLLLCGALL TGAPWLLALA
ALFWIAEALP APAYARIMQQ IYPPRYRGRA MSAVRIGVAI VVLVATPVAG WALDQVGHQP
LFALAAIFGV VSSLIFSRVR PLDGVAEPES PPTLRELLPI VRRDRRFMLY LIVLVVYGFG
AVMALPLYPL VQVSRLQLSY TTIGYLNLVQ SIFWLAGFFV WGRLLDRYGP LWVLRLSMLL
AAFVPFTYVW AGNAWMLLPA FICQGLMQGG FELGITTGVI DLAERGRVME YTALQAAIIG
VRGMLAPLLG SLLLGIGASE ALVLGAATGL VIASCVLLGA VQPPRTS
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