Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1009 |
Symbol | |
ID | 5538475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1319117 |
End bp | 1320172 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893152 |
Product | regulatory protein, DeoR |
Protein accession | YP_001431135 |
Protein GI | 156741006 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.393522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG CAGCAAACAA AGCGGAACGA CTGCTCCAAA TCGAACAATT ACTGCTCGCA CATCCCGAAG GGCTGACCCA GGCTGAACTG GCGCGTCGTC TGGGGGTGAA CCGATCCACC ATTCTGCGCA ATCTCGCGGA CGCCTCCAGA CACATTTACG AAGAGCCGGA CGGACGGCTC AAAATTGACC ATTGCGCCGA TCTGATCAAC CTGCGGCTGA ACCTGCACGA GGCGCTGGCG ATGCACCTGG CGGCGCGCCT GCTGGCGACG CGGATGGATC GGCAGAACCG GCATGCGGCG GCGGCCCTGC GCAAACTGGG GCATGCCATG GAGCGCTGGG CGCAGCGCAT AAGCGTACAC GTCCTGCATG CGGCGGACAT CATGGACAAC GCGGCGCAGC GCGACGACCC GGTGTACATC AGCGTGCTGG AGCGGCTGAC CGAGGGCTGG GCGAGCGAGC GGAAGGTGCG CGTCTGGCAC CAACTCGCGA CTGGCGAGAA GGTGCTGGAG TACCTGTTCA GCCCGTACTT CATCGAGCCA TACGCCATCG GGCAAACAAC TCACGTCATC GGGCGGGCGC GCCTGCTGGG CGAGCGGGGT TGGAGCGGCG AGAAGATGCG CACCTTCAAG ATCGAGCGGA TCAGGCGCGC CGAGATGACC GCTGAGAGCT ACCAGATCCC TGAGGACTTT GATCCGCGGG TATATCTGTC CGACGCATGG GGCATCTGGT CATCGGAAGG CGAGCCGGTA GAGGTAGCGT TGCGCTTCAG CGCGCAGGTG GCGCGGCGTG TGCAGGAAAC CCGCTGGCAC CGCTCCGAGC GCACCGAGTT GCAACCCGAC GGATCGCTGA TATGGCGGGC GCGGATCGCC GAACCGAAGG AGATGATCCC CTGGATCCGC GGCTGGGGCG CGGACGTGGA GGTGTTGGAG CCAAAGGCGT TGCGCGAGAC GCTGATGGGC GAGGCGAAGG CGATGGCCGA GCTGTACGGC TGGCGCGTCA GCTCGTCTCC TACAGACAAG CGCTCCACGA CCCTGGACGA TTTCTTTGGA GGTTAG
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Protein sequence | MKRAANKAER LLQIEQLLLA HPEGLTQAEL ARRLGVNRST ILRNLADASR HIYEEPDGRL KIDHCADLIN LRLNLHEALA MHLAARLLAT RMDRQNRHAA AALRKLGHAM ERWAQRISVH VLHAADIMDN AAQRDDPVYI SVLERLTEGW ASERKVRVWH QLATGEKVLE YLFSPYFIEP YAIGQTTHVI GRARLLGERG WSGEKMRTFK IERIRRAEMT AESYQIPEDF DPRVYLSDAW GIWSSEGEPV EVALRFSAQV ARRVQETRWH RSERTELQPD GSLIWRARIA EPKEMIPWIR GWGADVEVLE PKALRETLMG EAKAMAELYG WRVSSSPTDK RSTTLDDFFG G
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