Gene Rcas_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0983 
Symbol 
ID5538449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1288523 
End bp1289677 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content66% 
IMG OID640893130 
Productacetyl-CoA acetyltransferase-like protein 
Protein accessionYP_001431113 
Protein GI156740984 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACATG TCTATATCAT TGGGACCGGA GCGACGGCGG TTGGCGAGCA CTGGGACCGC 
AACGCTGCGT CGCTTGCTGT CGAGGCGCTG ACCGGCGCTC TTGGGACCAT TCCTGCATCA
CGGCTCGGCG CGCTCTACGT TGCCAGCGCG CTCAGTGGAA CATTGCACGC GCAGAGCCAG
ATTGGTGCGC TGATCGCCAC AACTGCCGGT ATCCCCGGCG TCGAAGCTAT CACGGTCGAG
GCTGGCGGAG CGTCAGGCGG TGTGGCATTG CGTCAGGCGT GCATGGCAGT CGCATCGGGC
GCCGTTGATC TGGCAGCGGT CGTTGGCGTC GAAAAAGTGA CCGATGTCCT CGATGCGCGC
CGCGAAGCGG CGCTCGCGCT GGCAACCGAT GCCGATTGGG AGGCGATCCA TGGTGTGACT
CTGACTGCGC TCTGGGCATT GCTTATGCGC CGATACATGC ATGAGTACGG GTACGCTGCC
GACGATTTTG CGCCATTCCC GATCAACGCG CACGCCAACG GGATCGCTAA CCCGCACGCC
ATGTATCGCT TTCCCATCAC TGCCGACAAG GTGCGCAGCG CGCCGATGGT CTCCGAACCG
CTCGGCCTGC TCGACTGCTC GACAGCAGCC GACGGCGCAG CCGCCGTGGT GATCGCCGAC
GAAGGGCTGG CGCGCGAACT CTGCGCAAAC CCGGTGCGCA TCGCTGGTTC CGCCGTCGCA
ACCGACACCC TGGCGTTGCA CTGCCGTTCC AACCCGCTAT GGCTGGCGGC AGCGGCGCAG
ACGACGACCG CCGCGCTGCG GTCGGCGCAC TTGACGCACG ATGATGTCCA GGTGTTCGAC
ATTACCGATC CGCACGGGAT TGCTGCGGCG CTGGCACTCG AGTCGAGCGG CTTTGCCGAA
CGTGGAACAG CGGTGGCGTT GGCGCGCGAA GGCGCCATTA CTCCGAAGGG ACGTTTGCCG
CTGGCGACTG GCGGCGGGTG CAAGGCGCGC GGTGATACGG TCGGCGCCAA TGGCGTCTAT
CAGATTGTCG AACTCGTTGC GCAATTGCGC GGGCACGCAG GTGCAGCGCA GGTCAATGGT
GCGCGGGTGG CGCTGGCGCA GTGCATGGGA GGCATCGGCG CGACCGTGGC GACTCACATT
CTGACACTCG ACTGA
 
Protein sequence
MRHVYIIGTG ATAVGEHWDR NAASLAVEAL TGALGTIPAS RLGALYVASA LSGTLHAQSQ 
IGALIATTAG IPGVEAITVE AGGASGGVAL RQACMAVASG AVDLAAVVGV EKVTDVLDAR
REAALALATD ADWEAIHGVT LTALWALLMR RYMHEYGYAA DDFAPFPINA HANGIANPHA
MYRFPITADK VRSAPMVSEP LGLLDCSTAA DGAAAVVIAD EGLARELCAN PVRIAGSAVA
TDTLALHCRS NPLWLAAAAQ TTTAALRSAH LTHDDVQVFD ITDPHGIAAA LALESSGFAE
RGTAVALARE GAITPKGRLP LATGGGCKAR GDTVGANGVY QIVELVAQLR GHAGAAQVNG
ARVALAQCMG GIGATVATHI LTLD