| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0939 |
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| Symbol | |
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| ID | 5538405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1245558 |
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| End bp | 1246574 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893088 |
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| Product | beta-lactamase |
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| Protein accession | YP_001431071 |
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| Protein GI | 156740942 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.18746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCAG AGACACATCC TGTCGACAAC CTGTTGCGCC CGTTCGATGG TCATGTTCCG
GGCATCAGCG CACTCCTGCT CGTCGATGGC AGTGCGCAGT ATGCCAGGGC GCTCGGCAAG
GCGAACCTGG AACAGAACAC GGCGATCAGT ATTGCCACAA ACTTTCGCCT GGCATCGGTG
AGCAAGCAAT TCACCGCTGC TGCCGTGTTG CGACTGGCAG AGCGCGGCGC GCTTTCTCTC
GATGAACCGA TTGTCCGCTT TTTTGAGTCG GCGCCTGCCT TCTGGCGACA GATAACGGTT
CATCACCTGC TGACCCACAC GTCGGGACTG GTGGACTACG AAGAATTGAT TGATCCCAAT
ACCGCCACGC AACTTCACGA TTGCGACGTG TTTGCCCTGG TGCGGCGCGT CGATACGGGA
TACGCTGCGC CAGGGGCGGC TTTTCGCTAT AGCAATACCG GCTACTGCCT GCTGGCGCTG
ATCGTCGAGC GTGTCGCCGC TCAACCGTTC GCTGCGTTTC TGCGTGAGCA GGTGTTTCTG
CCAGCCGGCA TGCGCTTCAC GGTCGCGTAT GAGGGCGAGA GCAGCGCCAT TCCGCGCCGC
GCGTTCGGGT ATTCATTCCG TGGCGGAACT TTTGTTCGCA CCGACCAGAA CCTGACAAGC
GCTACGCTGG GGGATGGAGG CATCTACAGT TCAACGATCG ACCTCGAACG CTGGGATGCA
GCGCTCTCGA ACGATACGCT GCTCCCTGAG CCATGGCGCG CTGCGATGTT TACCCCGCAC
ATCGCCATGC CATCTGGCGA GTCGTATGGC TACGGATGGT TTCTGACCAG CATTGCCGGG
CGCCGCGCCG CATACCATAC CGGCGAAACC ATCGGTTTCC GCACCGCCAT CGTGCGCCTG
CTGGATCGCC GGTGTACGGC GGTCGTCCTG GCGAACCGCA GCGAAGCAGC GCCGTTGCCG
CTTGCGCGAA CGCTAATAGA GACGGCTCTG GAGAAAGATA TGGTATCATG GGAATGA
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| Protein sequence | MIPETHPVDN LLRPFDGHVP GISALLLVDG SAQYARALGK ANLEQNTAIS IATNFRLASV
SKQFTAAAVL RLAERGALSL DEPIVRFFES APAFWRQITV HHLLTHTSGL VDYEELIDPN
TATQLHDCDV FALVRRVDTG YAAPGAAFRY SNTGYCLLAL IVERVAAQPF AAFLREQVFL
PAGMRFTVAY EGESSAIPRR AFGYSFRGGT FVRTDQNLTS ATLGDGGIYS STIDLERWDA
ALSNDTLLPE PWRAAMFTPH IAMPSGESYG YGWFLTSIAG RRAAYHTGET IGFRTAIVRL
LDRRCTAVVL ANRSEAAPLP LARTLIETAL EKDMVSWE
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