Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0870 |
Symbol | |
ID | 5538336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1139717 |
End bp | 1140277 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893021 |
Product | hypothetical protein |
Protein accession | YP_001431004 |
Protein GI | 156740875 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000832206 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACATCG AGACGAGCGT GAACGGATTG GTCGTTGAAA GTCGGTCGGG CATGCGGGTC GAGCTGAGCG GAGCGCTTGC CGGACTGATC GGTGGGGTCA TGATGGCAAT CATCGGCGCA GCGCTTGCTA TCGCCATTGG CGATGACCTT TGGAAAGCCC CGAAATTAAT CTCCACATTC GTGGTAAACC CCGATGCAGC GACGGCGCCG GGCTTCCTCG CCGGTCCGGT CGTCATTGGC AGCCTGATCC ATCTGGCGCT CTCGGCGTTG TTCGGGATCG GTTTTGGCGT ACTGACGACG CGCATCTGGA AGATGCCGCT CAGTTATGGC GCGCCAATGG TGTTCGGCTT CGTGTACGGA TTGACGATCT GGTTGATCGC CTACTTCATC ATACTGCCGC TGCTCAATCC GCTGGTGCTC GAAATCTATG CTCCGGCATT TCTGATCCAG AACCTGACGT ATGGGCTTTC GACGGGGTTG GCATACGGTT TTCTGCGTTC GTCATCGCGC TTTGATCGGC GTGAGGAGCG TAGCGAGCGG CACAGAGCGG TGAAGGCGTA G
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Protein sequence | MNIETSVNGL VVESRSGMRV ELSGALAGLI GGVMMAIIGA ALAIAIGDDL WKAPKLISTF VVNPDAATAP GFLAGPVVIG SLIHLALSAL FGIGFGVLTT RIWKMPLSYG APMVFGFVYG LTIWLIAYFI ILPLLNPLVL EIYAPAFLIQ NLTYGLSTGL AYGFLRSSSR FDRREERSER HRAVKA
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