Gene Rcas_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0870 
Symbol 
ID5538336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1139717 
End bp1140277 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content58% 
IMG OID640893021 
Producthypothetical protein 
Protein accessionYP_001431004 
Protein GI156740875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000832206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATCG AGACGAGCGT GAACGGATTG GTCGTTGAAA GTCGGTCGGG CATGCGGGTC 
GAGCTGAGCG GAGCGCTTGC CGGACTGATC GGTGGGGTCA TGATGGCAAT CATCGGCGCA
GCGCTTGCTA TCGCCATTGG CGATGACCTT TGGAAAGCCC CGAAATTAAT CTCCACATTC
GTGGTAAACC CCGATGCAGC GACGGCGCCG GGCTTCCTCG CCGGTCCGGT CGTCATTGGC
AGCCTGATCC ATCTGGCGCT CTCGGCGTTG TTCGGGATCG GTTTTGGCGT ACTGACGACG
CGCATCTGGA AGATGCCGCT CAGTTATGGC GCGCCAATGG TGTTCGGCTT CGTGTACGGA
TTGACGATCT GGTTGATCGC CTACTTCATC ATACTGCCGC TGCTCAATCC GCTGGTGCTC
GAAATCTATG CTCCGGCATT TCTGATCCAG AACCTGACGT ATGGGCTTTC GACGGGGTTG
GCATACGGTT TTCTGCGTTC GTCATCGCGC TTTGATCGGC GTGAGGAGCG TAGCGAGCGG
CACAGAGCGG TGAAGGCGTA G
 
Protein sequence
MNIETSVNGL VVESRSGMRV ELSGALAGLI GGVMMAIIGA ALAIAIGDDL WKAPKLISTF 
VVNPDAATAP GFLAGPVVIG SLIHLALSAL FGIGFGVLTT RIWKMPLSYG APMVFGFVYG
LTIWLIAYFI ILPLLNPLVL EIYAPAFLIQ NLTYGLSTGL AYGFLRSSSR FDRREERSER
HRAVKA