Gene Rcas_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0869 
Symbol 
ID5538335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1138506 
End bp1139072 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content59% 
IMG OID640893020 
Producthypothetical protein 
Protein accessionYP_001431003 
Protein GI156740874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000221181 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACGC AATCGCAGGT CAGTCGTTCA GCAGCGTCGC AGGTTGTTCG CGCATCGGCA 
ACACCACTGC TGACGAAGAT CGAAGTCGGT GGTGCAGTCG CCGGTCTGGT TGGCGGTGTC
ACGATGGCGG TGGTTGGTGC GATCCTGGCG ATTGCGATGG GCGCCGATCT GTGGAAGGCG
GCAAAACTGA TTTCGACATT TGTGCTAGGG CTGGGTGCGA CCGCCGGTGA AGGGTTTGTC
GCCATTCCGG TGATCGTCGG CAGCCTGATC CACCTGTCGC TCTCGGCGTT CTTTGGCGCT
CTGTATGGCA CAATCTCCTG CCGCGTCTGG AAGATGCCGC TCGATTACGG CGCGCCGGTG
GTGTTCGGCT TTGTGTACGG TCTGGCGATC TGGCTGATTG CCTATTTCAT TGTCCTGCCG
ATTGTCAACC CACTGCTGCT CGAAATCTAT GCGCCTTCGT TCCTGATCCA GAATATGGTC
TATGGGATGA TCCTGGGTAT GGTCTACGCG GCGGTGCGCT CCGCGCCCTA TATTCACTTT
GAGCAGCGCT CCTCTGCACA GGCGTAG
 
Protein sequence
MSTQSQVSRS AASQVVRASA TPLLTKIEVG GAVAGLVGGV TMAVVGAILA IAMGADLWKA 
AKLISTFVLG LGATAGEGFV AIPVIVGSLI HLSLSAFFGA LYGTISCRVW KMPLDYGAPV
VFGFVYGLAI WLIAYFIVLP IVNPLLLEIY APSFLIQNMV YGMILGMVYA AVRSAPYIHF
EQRSSAQA