| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0863 |
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| Symbol | |
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| ID | 5538329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1127945 |
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| End bp | 1129609 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893014 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430997 |
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| Protein GI | 156740868 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000684677 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGACCG AGCCAAAACT GCCGATTCCG CTTGAACTTG AACCGGATGA GCAGGTTGTC
TTGGTTGGAA AGCGGCACTG GATCGAATTG CTGCAATCGA GCCTGGTATT CCTGGTGATT
GCGGTCATCA CGGCAGCGAT TGCGCTGTTC CGCGCAGCCG GAGGCGCGCT GTTGATCATG
CGCGAAGGAG TGACCCGTCC CTTGACCGAT CCGATCAACA TCGCGCTCTT CACCTTGTTG
CTGGTCCTGG TGGCGCTCTG GGCGCGCGGC GAGGCGAAGA AGCAACGGCG CAAGGATACC
CCGTGGCGCA ACCCGGACGT GTTGTACCTC CTGGCGATCT TTGCGCTCGG GGCGGCGATC
TGGTTCCGTC TCAGCGGCGG CGAACTGATC GTCATCGACC CGACCTACTC GCGCGCCGGC
GATGCGATCA ACATTGTGTT GAGCGTCACG ACCCTGTTGA TGCTGGCAGC GGTGGCGTAC
CTCTACAACG ACTGGCGCAA TGATGTGCTA ATCGTCACAA ACAGGCGCGT CATTTATGAT
GAAGAAACAA TGTTCATCCG CCATGTGCGG CAGCAGATTC TGATCGACGA CATTCAACAG
GTCAATGTGC GCGCCGACAC GTATCAGGCG ACGTTGTTCG GGTATGGCAA AATCATTATT
CGTTCGTTCA GCCCGCGCAC GTTGGAGTTC GACTTCGCCG CAAGGCCGCG TGAGATCGAA
AAAGCGATCA TGGATCAGGT GCGTAACCTG CGGCGCCGCC AGGAACCCGA TCTGCTGCGC
ACTCTGATCG AGGATCAGGT GTACGGGAAC AAGCCACAAC AGCAGTCGGC GCCGTCGGTT
CAGGTGCGCG CCCAACGCTT CCCTCTTCCC GCACTCTACC CGCCTAATCC CGAAATCTTT
CCCGATCGCA TCGTCTGGCG TCCATCCTGG GTGTATGTGC TGATTCGGTT GCTTCGTCCT
CTGGGCGGCT TCGCCATAAC TATGGTGGTG CTCGCTCTGC TGGTGCAGTT CAGTCTGATC
GATGGCGTGA CCGTCACCCT GCTCGTTTTT GCGGCGCTCC TGTTTTTCGG CGTCTGGGGG
TGGTGGATCC GTGAGGCGCT GATCCACGAC AACTACATCC TGACCCGCAC CGACATTATT
GACATTGATC GGCGCCCGCT GGGACCTGAG AATACGCGGC GCGCGCAACT CTCCGCCATT
CAGAATATCT CGTTCGATGT CAGTTTTGTT GAACGCCTCC TGGGGCTTGG GACCGTCGTG
GTCGAGACCG GCGGCGCGGC CGGCGGGAAG TTCACCTTCG ATCACGTGCC GGACCCGCGG
GGCGTTCAGG CGACGATCAA CGATTATCTG ACCGATTTTC GCAAGCACGA GAAAGAACGT
CAGTTGCGCG ATTCGTTGGC GCTGCTCAAA CAGTACGATC AACTCCAGCG TGAGCACGGC
GAAAAAATGG ATCGTGCCAG TTTCGAGAAG GCGGTTGAGG AATTGGTCGG ACGTTCGCTC
TCCAGAAATT CGTCTGACCC CTATGGCTCA ACCTCACCCA ATGGCGCAGT CTATACCGAG
GTCGAGACGC ATATGCGGCG AATGGCGCGT CAGGCGCGGC GGCGCGCCAC GATTCGCGCA
CTGCGCGAAC GAATGCGTCG CCGTAGCCAC GAACAACCCT CATAA
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| Protein sequence | MMTEPKLPIP LELEPDEQVV LVGKRHWIEL LQSSLVFLVI AVITAAIALF RAAGGALLIM
REGVTRPLTD PINIALFTLL LVLVALWARG EAKKQRRKDT PWRNPDVLYL LAIFALGAAI
WFRLSGGELI VIDPTYSRAG DAINIVLSVT TLLMLAAVAY LYNDWRNDVL IVTNRRVIYD
EETMFIRHVR QQILIDDIQQ VNVRADTYQA TLFGYGKIII RSFSPRTLEF DFAARPREIE
KAIMDQVRNL RRRQEPDLLR TLIEDQVYGN KPQQQSAPSV QVRAQRFPLP ALYPPNPEIF
PDRIVWRPSW VYVLIRLLRP LGGFAITMVV LALLVQFSLI DGVTVTLLVF AALLFFGVWG
WWIREALIHD NYILTRTDII DIDRRPLGPE NTRRAQLSAI QNISFDVSFV ERLLGLGTVV
VETGGAAGGK FTFDHVPDPR GVQATINDYL TDFRKHEKER QLRDSLALLK QYDQLQREHG
EKMDRASFEK AVEELVGRSL SRNSSDPYGS TSPNGAVYTE VETHMRRMAR QARRRATIRA
LRERMRRRSH EQPS
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