| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0840 |
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| Symbol | |
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| ID | 5538306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1099847 |
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| End bp | 1100647 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640892992 |
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| Product | histidine triad (HIT) protein |
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| Protein accession | YP_001430975 |
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| Protein GI | 156740846 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.263994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000646753 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCTCA TCTTTCGTTC AGTTCATAAC CCTCATAGCC ATCTTACTGT CAAAGATCGT
ACTCAGGCAT CCTTCCCGCT CAGGAATCTG CTCTCGCGAG GGCTGATCAA CGGACGAGTG
CTTGATTTTG GATGCGGATT GGGAGCAGAT GTCAATCACT TAAAGAAGCA AGGCCACGAT
GTTACTGGTT ATGATCCTTA CTATGCGCCC AATGTCCCAA AGGGAAAGTT CGATACAATT
ATATGCCTGT ATGTCTTGAA TGTGTTGCTT CCAGATGAGC AGTCTCATGT GTTGATGGCT
ATCTCAGAAT TGCTATATCC AACTGGAAGC GCGTACTTTG CCGTTCGCCG CGATATTCGG
CGTGACGGTT TTCGCAATCA CGTCAAATAT CACAAGAACG TTTATCAGTG CCAAGTTACA
TTGCCCTATA AAAGCATCTT GCGCACCGAT CATTGTGAAA TCTACCGGTA TCGTCATTTC
AATCAGTTGC AGGTAAATGA GTCCTGTTCT TTCTGTGCTC CAGCAAGTAA TTGTGAGTTA
TTGACCGAGT CAGCTAATGC CTATGCTGTT TTGGAAAATT CCTCCTCTCT ACCTGGTTAT
ACCCTCGTGA TCCCCAAGCG GCACGTCAGT TACTTCGATC TTTCACTTTA TGACAGGAAT
GCCTGCTGGC AAGTAGTAGA TCGCGTGAAG ATGCTGCTCA GCGAGCGTTT TCATCCTGAT
GGTTTCAGGG TGAAGGTTGG TCAAGGCATA GCCACAGAAT GTGCTGGTTG GCACGGGTGT
ATCCATGTAA TCCCCTGTTA G
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| Protein sequence | MNLIFRSVHN PHSHLTVKDR TQASFPLRNL LSRGLINGRV LDFGCGLGAD VNHLKKQGHD
VTGYDPYYAP NVPKGKFDTI ICLYVLNVLL PDEQSHVLMA ISELLYPTGS AYFAVRRDIR
RDGFRNHVKY HKNVYQCQVT LPYKSILRTD HCEIYRYRHF NQLQVNESCS FCAPASNCEL
LTESANAYAV LENSSSLPGY TLVIPKRHVS YFDLSLYDRN ACWQVVDRVK MLLSERFHPD
GFRVKVGQGI ATECAGWHGC IHVIPC
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