Gene Rcas_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0815 
Symbol 
ID5538281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1071492 
End bp1071968 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID640892967 
Producthypothetical protein 
Protein accessionYP_001430950 
Protein GI156740821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000351939 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGTATC TTGCCATACT CACACTCCAC AACCTGATGC GCTGGGTGAC GCTGGTCGCC 
GCGATCTGGG CATTGTACCG CGCCTATCGA GGTTGGTTCG GCAGACGCCC GTGGACTCCC
GCCGATCAGC GCGCCGGGCG TTGGTTTGCC CTGGCGCTCT CGCTGCAACT GCTGATCGGC
GGGGTCTTTT ACTGCCTGCC GGACTCGGTC GCGCAACTGG CATGGACAAA CCTGAATGTG
GTAATGCGCG AACCGTCGCT CCGCTTTTTT GTCGTTGAAC ACAGCGTACA GATGTTTGTG
GCGCTGAGTC TGACGCACCT GGGCAGCGCG CTGGCGCGCA GGGGGCGCCA GGATGCGGAT
CGCCACCGGC GCGCTGCATT GTTGTTCTCG GTCAGCCTGC TCATTGCTTT TGCCGCCATT
CCCTGGCCCT GGACGCCACA TGAGCGACCA CTGGTGCGCC TGGGCTGGAA ATGGTAG
 
Protein sequence
MVYLAILTLH NLMRWVTLVA AIWALYRAYR GWFGRRPWTP ADQRAGRWFA LALSLQLLIG 
GVFYCLPDSV AQLAWTNLNV VMREPSLRFF VVEHSVQMFV ALSLTHLGSA LARRGRQDAD
RHRRAALLFS VSLLIAFAAI PWPWTPHERP LVRLGWKW