| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0787 |
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| Symbol | |
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| ID | 5538253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1029313 |
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| End bp | 1030881 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640892939 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430922 |
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| Protein GI | 156740793 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.421707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCACT CAATATCTTC CATCAAAGAA AGCGAAACAA CCATCGCTCA ACGACGCGCG
CATCGAATAG CATCCTGGAG TGCGTTGAGC ATCGTACTTT TAGCGTTGAG CCTCTGGAAT
CTCGATGGAC CAGCGATGTG GTGGGACGAG GGATGGACCC TATCGGTTGC GAGAAATTGG
GCGGAGCAGG GGCACTACGG ACGCCTGCGC AATGGTCAGC GAGCGCGCCC TGGTCTGGAG
GCGGCTTTCA CTACAACGTT GCCGGTTGGA ATGATGATGC GCGCATTTGG TGTGGGTCTC
TGGCAGGGAC GACTCTTCGG AGCACTCTGT GCTGTGGCAG TTGTCCTGCT GTTGGCGGCG
CTCGCAGCCA GATTGTATGA CCGGCGCGTC GCGGTTGCGA CAGTCGTTGC CGCCCTGTGT
ATGACCGCAT TTCCGACAAT CCATCCATTG CTGCTGGGAC GCCGGGTGCT AGCAGAGATA
CCGATGCTAA TGTATCTGCT GGTCGGATAT CTGTTCCTAT GGCGTGCGCT TGTCAATCGA
TGGGTCGCAC TCTTCCCGGC GGCATTGTTT CTCGCGCTAG CCTGGGTGAG CAAAGCGCAA
CTCTCACCTT TCCTGATTGT ATCGCTGACA ATGTCCGCGC TAGTCGCCGC GCTGATGCGC
CGATGGCGCA TTGCCGCTCT TTTCACTCTC GTTGCAGGCG GAACAGTGCT TGGCGCCAGG
ATCCTTCAGC AATCGGTCTA TCCGATTCTG ATCGACGCTC AACTGCCGCC AGACCCAACA
ACAGGACTGA TTGAAACCGT TGCCATCGTG ACCGCCCCCG CTCGTCGCCT CGATGCCATC
CAGAATCTCG CCATCTTTGG GCTTCCTGCT CTTTGTGGCA TGCTCTGGGG GACGTGGCGA
CTGTGGCATG ATCGCTCTGC AGCCAGCAGC GGCGCGCCGG TCTGGTATAC TCGCCTGACC
TTGCTCGCAC TATGCGGCAG CTGGCTAGCA TGGTACCTCG TGTTTTCCAT CGGATGGGTG
CGTTACATGG GGCCTGCCAT TATTGTCGCG AGCATTTTTG TAGCTGACCT TCTAGCAAAC
GCTACCGATG GCTTTGCCAT TCGGCATAGT CTCGTGTCGC TAATCAACCT TCTCACGTTA
CGCCGGTGGA CACGGACGGG CGGAGCGGCG TTGTTCGGCA CAGTGCTCGT ACTCTGGGGA
GGAACGTTGA CAGCGGTAAG CGTTGCCGCC ACCTATCCGG TACGCGACTA TTCCGCTCAG
CGCGTGGCGC AGTGGCTCAA TGCGCAACCG GAAGGAACGA GGATCGAAAC GTATGAGACT
GAGCTTCACT TTTTGCTTGA TCAACCCTAT ACTTTTCCGC CAGACCAGGT GCATGTTGCG
TTGCTGCGAC GCCTCTGGGA AATAGACGAT AACGTGCTGA TCGCCTATGA TCCGATGGTC
AACGACCCGG ATTTCCTGGT AGAGGGCGGA ACAAGCGTTG CCAAACTGTA TGAGTCGACA
CTGGCAAGCG GACGATTCCG TCTCGTGCTG GAAGATGGAC CTTACCGTGT ATTCGAGCGA
GTGCGCTAA
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| Protein sequence | MDHSISSIKE SETTIAQRRA HRIASWSALS IVLLALSLWN LDGPAMWWDE GWTLSVARNW
AEQGHYGRLR NGQRARPGLE AAFTTTLPVG MMMRAFGVGL WQGRLFGALC AVAVVLLLAA
LAARLYDRRV AVATVVAALC MTAFPTIHPL LLGRRVLAEI PMLMYLLVGY LFLWRALVNR
WVALFPAALF LALAWVSKAQ LSPFLIVSLT MSALVAALMR RWRIAALFTL VAGGTVLGAR
ILQQSVYPIL IDAQLPPDPT TGLIETVAIV TAPARRLDAI QNLAIFGLPA LCGMLWGTWR
LWHDRSAASS GAPVWYTRLT LLALCGSWLA WYLVFSIGWV RYMGPAIIVA SIFVADLLAN
ATDGFAIRHS LVSLINLLTL RRWTRTGGAA LFGTVLVLWG GTLTAVSVAA TYPVRDYSAQ
RVAQWLNAQP EGTRIETYET ELHFLLDQPY TFPPDQVHVA LLRRLWEIDD NVLIAYDPMV
NDPDFLVEGG TSVAKLYEST LASGRFRLVL EDGPYRVFER VR
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