Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0770 |
Symbol | |
ID | 5538236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1008089 |
End bp | 1009447 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640892925 |
Product | hypothetical protein |
Protein accession | YP_001430908 |
Protein GI | 156740779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.385079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACC TGCCACGAGC GATTATACCG GTCCTCCGCA AGTTCGAGTT GCTGTTTAGC GAGCGTGTAT GGGAATGGGC GAAGATACTG CTCATCGGCG CCATCCTGGC CCCCGGCAAG CGCACGGTCA CTTCGGCGCT GCGGGTGATG GGGCTGAGCG ACGATGCGCA ATTCCAGAAC TGCCATCGCG TCCTCAACCG CGCCGTCTGG TCGCCCTACG CCGCCAGCCG CATCCTGCTG CGCCTGCTCG TCGACGCCTT CGTTCCGTCC GATACGGCTA TCGTGCTCGG CCTCGACGAC CATATCGAGC GCCGGCGCGG GGCCAAGATC AAGGCCAAGG GGATCTACCG CGACCCTGTC CGCTCGTCGC GCTCGTTCTT CGTCAAGACC AGCGGCCTGC GCTGGTTGTG TCTGATGCTG CTCGCCCCCA TCCCTTGGGC CCAGCGTGTT TGGGCCTTGC CCTTTCTGAC CGTCCTGGCG CCCTCCGAGC GCTGCCATCA GGAGCTCGGC AAGCGCCACA AACAGCTCAC CGACTGGGCG CGTCAGATCA TCTTCCAAGT CCGTCAGTGG CTGCCCGAGC GCGTGCTGGT CGTTGTGGCC GACAGCAGCT ACGCCGCGCT CGAACTGCTT GCCGCCTGCC AGGGCTTGCC CAACCCCGTT ACCGTGGTCA CGCGCTTGCG CTTGGATGCG GCCTTGTACG ACACGGCGTA CGTGCACCCA GCAGGGCGAC CCGGTCGGCC GCGCAAGAAA GGCGCACGGC AGCCGACCCT GGAGCAGCGG CGCAGCGACC CGACCACAGA CTGGCAGCAC ACGAGCGTGC GTTGGTATGG CGGAACGACG CGAACGGTGC GGCTGGCATC GGCAACGGCG GTCTGGTATC ACAGTGGCTT GCCGCCGGTG AGCATTCGCT GGGTGCTCAT TACCGACCCC GATGGGAAGT TTGAGGCCCA GGCGCTGCTG AGCACGAACC CGGCGGCTAC CCCCAAGGAG AGTGTGGAGT GGTTCGTGAT GCGCTGGCAG GTGGAGGTCA CGTTCGAGGA AGCGCGAGCA CACTTGGGCA TCGAGACCCA GCGCCAGTGG TCGGACCTGG CGATCCTGCG TACGACACCG GTGCTGTTGG GGTTGTTCTC GCTCGTGACG CTGTTCGCCC ATCACCTACT CCAAGCAGGC GAGTTGCCCG TGAGGCAGGC GGCCTGGTAC ACCAAGGCGC TGCCGACCTT CAGCGACACA CTGGCCTTCG TCCGCAAGCA GCTCTGGCCG GTCACCATTT CTTGGATGTC GCCTGCGGAA GCCGACATGG TCAAAATCCC GAAGTCGTTA CTTGTTCGCC TGACTGATGC GCTCGCCTAT GCTGCGTGA
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Protein sequence | MRNLPRAIIP VLRKFELLFS ERVWEWAKIL LIGAILAPGK RTVTSALRVM GLSDDAQFQN CHRVLNRAVW SPYAASRILL RLLVDAFVPS DTAIVLGLDD HIERRRGAKI KAKGIYRDPV RSSRSFFVKT SGLRWLCLML LAPIPWAQRV WALPFLTVLA PSERCHQELG KRHKQLTDWA RQIIFQVRQW LPERVLVVVA DSSYAALELL AACQGLPNPV TVVTRLRLDA ALYDTAYVHP AGRPGRPRKK GARQPTLEQR RSDPTTDWQH TSVRWYGGTT RTVRLASATA VWYHSGLPPV SIRWVLITDP DGKFEAQALL STNPAATPKE SVEWFVMRWQ VEVTFEEARA HLGIETQRQW SDLAILRTTP VLLGLFSLVT LFAHHLLQAG ELPVRQAAWY TKALPTFSDT LAFVRKQLWP VTISWMSPAE ADMVKIPKSL LVRLTDALAY AA
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