Gene Rcas_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0681 
Symbol 
ID5538146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp890454 
End bp891722 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID640892839 
Productmolybdenum cofactor synthesis domain-containing protein 
Protein accessionYP_001430823 
Protein GI156740694 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0133963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCG AATCACCTTA TCCGATGGTC TCCGTCGATG AGGCGCAGCG CCTCATCACG 
GCACACATTA CGCCACTCGA CGTCGAAGTG ATCGACGTGC TCCATGAGTC TGCCGATGGT
CGGGTGCTGG CAGAGGATGT TTACGGCATC GAACCACTGC CCGACGTGCC CAAAGCGGGG
GTTGATGGAT ATGCGCTGCG CAGCGCCGAT GGCGATGCTC CACGCCGGGT GATCGCCGAG
GTGACTGCCG GAGCAACGCC GGGATTGCGT GTCGAGGCGG GAAGCGCTGT GCGCATCATG
ACCGGCGCTC CGGTTCCAGA AGGCGCGGAT GCTGTGATCG CGGTAGAGCG CACTGAGGAG
CGTGATGGGG TGTTGATCGT GCAGCACGCG CCTCGCGCAG GCGATAACAT TCACACGATC
GGGCAGGATA TTGCTGCCGG GCAACTGGTG CTGGCGCGCG GGACGGCGCT CGGCGCTGCC
GAGATCGGGT TGCTGGCGAC GGTGGGGCGC ACCAGGGCGA TGGTGTACCG CCGTCCGGTG
GTGGCCGTGC TGTCAACCGG CGATGAGGTG TATGAGCCGG ATGGCGAGGT TTTTCCCGGT
GGCGTGCGCG ATAGCAATCG CTATGCGCTG ATGGCGGCGG TGCGGGAAGC CGGGTGTCTG
GCGCTTTCGC TCGGTATTGC GCGCGATGAT GTGAACGTAC AGCGCGCTGC AATCCTGGAG
GCGCTCGATC GCGCCGATGT GCTGCTCACG AGCGGCGGCG TCTCGATGGG GACGCGCGAT
CTGATCAAGC CGTTGCTGGC AGAGTTGGGG ACGGTGCATT TCGGACGGAT TGCGTTCAAG
CCGGGCAAAC CGACAACCTT CGCCACTATC GAACGCCCCA ATTCGGGGCG ATTATTGCCG
TTGTTGACAT TCGGATTGCC AGGATACCCG GTTTCGTCGC TGGTGTCGTT CGAGGTGTTT
GTGCGTCCTG CGCTTCGTCG TTTGCAGGGC GATGCGCGTC CGGATCGCCC ACAGGTGCGG
GTGACGCTGC GCGATCCAAT CAGCCCATCT CCTGATCGCC CGGAATATCA GCGTGCCATT
GTCAGTTGGG AGGATGGGCG ACTGATGGCG CGCAGCACCG GACGGCAGGG GAGTAGCCGG
TTGCTGTCGA TGCTTGGCGC CAATGCGCTC CTTATCGTTC CCGCAGGGAC GGAGGCGCAT
CCGGCTGGCG CAGAACTCGA CGCTTTGATG ACCGGACCGC TGGCGCCGCA GGGTATGTCT
GTGCTCTGA
 
Protein sequence
MQRESPYPMV SVDEAQRLIT AHITPLDVEV IDVLHESADG RVLAEDVYGI EPLPDVPKAG 
VDGYALRSAD GDAPRRVIAE VTAGATPGLR VEAGSAVRIM TGAPVPEGAD AVIAVERTEE
RDGVLIVQHA PRAGDNIHTI GQDIAAGQLV LARGTALGAA EIGLLATVGR TRAMVYRRPV
VAVLSTGDEV YEPDGEVFPG GVRDSNRYAL MAAVREAGCL ALSLGIARDD VNVQRAAILE
ALDRADVLLT SGGVSMGTRD LIKPLLAELG TVHFGRIAFK PGKPTTFATI ERPNSGRLLP
LLTFGLPGYP VSSLVSFEVF VRPALRRLQG DARPDRPQVR VTLRDPISPS PDRPEYQRAI
VSWEDGRLMA RSTGRQGSSR LLSMLGANAL LIVPAGTEAH PAGAELDALM TGPLAPQGMS
VL