Gene Rcas_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0640 
Symbol 
ID5538103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand- 
Start bp842036 
End bp843262 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content63% 
IMG OID640892797 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_001430783 
Protein GI156740654 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGC GGCGTCCCAT CCTGGTTGTG GGATTGACCG ATGCCGGCGC TGTGGGAGTG 
CCTGCTGCCC TGTACGACCG GATCATGCGC GCTGAGATTC TCGTTGGCGG GCAACGCCAT 
CTTGCCGCGT TTCCTGAGTT CACCGGCGAG CGGTTGGTCA TCGGCGCGTC GGTCGAACCG 
GCGCTGGAGC GGTTGAAACT GGCATGGGAA CGCGGTGAGT TGGCAACTGT CCTCGCGTCG 
GGCGATCCGC TCTGGTACGG GATCGGCGTA TCGCTCCGCC GGGCGCTGCC GCCGGAAGCC 
CTCGACATCA TTCCGGCGCC AACCTCGGCG CAACTGGCGT TCGCGGCGCT GGCGGAACCC 
TGGCACGATG CCACACTGCT CAGCGCTCAC GGTCGTCCAC TCGAAACAGT GATTGCACAT 
GTGCTGACAT CACCAAAGAC TGCCCTGCTG ACCGATCAGC GGAACACGCC CGCACGCATT 
GCCGCTGCCT TGCTGGAATC TGGCTTGCCG CCAACCACGC GTTGCGCAGT TTGTGAACAT 
CTGGGAGGCT CTGCACAGCA TATTGTGCGC ACAACGCTCG CCGAAGCGGC AGAGCGGTCA 
TTTGCGCCGC TGAATGTGTT CGTCGTCTGG AACGATTATC TCATCCATCA CACGCCTGTC 
CCCCCCGGTT TGCCCGATGA GGCGTTCAGC ACCGTCGCCG GTCAGATCAC CAAACGCGAA 
GTGCGTTTGC TGAGCCTGGC GGAACTGGCG CTTCGGTCGG GTGATGTCCT GTGGGACATT 
GGCGCAGGCA GCGGGTCGGT CGGCATCGAG GCGGCGCGCG CCTGCCCGAC TGCCCGGGTG 
TACGCGATTG AACGGCGCGA GCCGTTTGTA AGACACATCC ACGAAAACCT GCGGCGTTTC 
CCGGCGCCGA ACCTGCACGT CATCCATGGC GAAGCGCCGG AAGCCTGCGC CGACTGTCCC 
GATCCGCACG CTGTGTTCAT CGGCGGCAGC GGCGGTCGCC TGGTAGAGAT CATCCGCACG 
GCGCAGCAGC GTCTCAGACC TCAGGGGCGT CTGGTGCTGA ACCTGGTTGT GTTCGACCAT 
GTGCAGCAGG CGCTGGCGCT CCTTCCTGAG GCGCGGATGA CGCAGGCACA GATTAACCGC 
AGCATGCCCA TCCAGTCGCT GCTGCGCCTC GAAGCGCTCA ATCCCGTCTT TATCGTTGTC 
TGGCAAAAAG AGAACCAGCA TGGATAA
 
Protein sequence
MTMRRPILVV GLTDAGAVGV PAALYDRIMR AEILVGGQRH LAAFPEFTGE RLVIGASVEP 
ALERLKLAWE RGELATVLAS GDPLWYGIGV SLRRALPPEA LDIIPAPTSA QLAFAALAEP 
WHDATLLSAH GRPLETVIAH VLTSPKTALL TDQRNTPARI AAALLESGLP PTTRCAVCEH 
LGGSAQHIVR TTLAEAAERS FAPLNVFVVW NDYLIHHTPV PPGLPDEAFS TVAGQITKRE 
VRLLSLAELA LRSGDVLWDI GAGSGSVGIE AARACPTARV YAIERREPFV RHIHENLRRF 
PAPNLHVIHG EAPEACADCP DPHAVFIGGS GGRLVEIIRT AQQRLRPQGR LVLNLVVFDH 
VQQALALLPE ARMTQAQINR SMPIQSLLRL EALNPVFIVV WQKENQHG