Gene Rcas_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0639 
Symbol 
ID5538102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp841315 
End bp842043 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content60% 
IMG OID640892796 
Productprecorrin-2 C20-methyltransferase 
Protein accessionYP_001430782 
Protein GI156740653 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA CTGCCACACT GACCGCCGTC GGTCTCGGAC CTGGCGATCC CGAATTGATC 
ACGCTCAGGG GTTTGCGCGC CATTCAGTCG GCGGATATCT TGTTCGTTCC ACAGAGTCGC
AATGGCGACC AGAGCCTGGC GCTGCGCATC GCCGAACCCT GGATCGACCG CGCGCGGCAG
GCGGTCGTCG CGCTGCCGCT GCCCATGACG CGCGATTCTG CTCAGTTGCA TCCGGCGTGG
CGTGCTGCTG CCGAAACCAT CGTATCGGAA TTGGGCGCCA ATCGGCATGG CGCATATCTG
CTCCTCGGCG ATCCGTTGCT CTATGGCACC TTTGTCTACC TCTGGCGCGA ACTGTCTGCT
CTCTGTGCAG TGGTGACGGT ACGCATCATC CCCGGTGTGA CATCGTTTGC AGCAGCGGCG
GCGGCAGGCG GCATGCCTTT GGCGATGAGC AATGAACGCA TGATTGTTGT TCCTGCAAGT
TATGAAACCG ATGCAGCAAC CCTGCGCCGA TTGCTCTGCG ATTTTGAAAC CGTCGTACTG
ATGAAGGCAG GAGCGGCGCT GCCCGCGATT GTGGCGGCGC TCGATGAACT CAATCTGCTG
GATCATGCGC TCTATGCCGA GCGCGTCGGG ATGCCGGAAG AAGTCATTGC ACGCGACCTG
CGTTCGCTCG ATCCGCAGCG ACGCCCCTAT CTGTCGCTGG TCATTGTTCG CCGTGGAGAC
ATTGTATGA
 
Protein sequence
MDKTATLTAV GLGPGDPELI TLRGLRAIQS ADILFVPQSR NGDQSLALRI AEPWIDRARQ 
AVVALPLPMT RDSAQLHPAW RAAAETIVSE LGANRHGAYL LLGDPLLYGT FVYLWRELSA
LCAVVTVRII PGVTSFAAAA AAGGMPLAMS NERMIVVPAS YETDAATLRR LLCDFETVVL
MKAGAALPAI VAALDELNLL DHALYAERVG MPEEVIARDL RSLDPQRRPY LSLVIVRRGD
IV