| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0624 |
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| Symbol | |
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| ID | 5538087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 822993 |
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| End bp | 824105 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892782 |
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| Product | beta-lactamase |
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| Protein accession | YP_001430768 |
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| Protein GI | 156740639 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.540607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.110236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG TCAAACTCAC TATCGATCCA AAGCGACTAC AGCGCGCGTA TGACATCTTG
CAGCGCTGGC TCGATGAACG GATCGTCACG GCGATTGCCT CAGTCTTGCT TCATCGCGGG
CGATTGGCGG GTGAATTCTA CGGCGGGAGC GCTGCACCGG CGCCCAATGC CCCACCGATC
AACGGCAACA GCCTGTTCCA TATTGCCTCA ATCGGGAAGC CTATGACCGC CTTTGCCGTC
ATGCTTCTCG TGGAAGCCGG GCGCCTCACG CTCGACGATC CGGTCGCCGA CATTCTGACA
GAGTTTCGTG GCGCAGGGCG CGACGTGATC ACTGTGCGCC AGTTGTTGAC CCATACCTCC
GGTCTGCCGC AGGACCCGGA TCGCAGCCGG TTGCCGCCCA ACGCCACCAC ATCCGAAGAA
TTGCGCACTT ATCTTGCTGC CGGTCCCATT GTGCCTCCCG GCAGCAAAGT CGAGTACAGC
AACGTCGGAT ATGGGTTGCT GGGGCTGATC ATCGAAGAAG TTGGCAGGCA ATCGTTTGCG
TCATTTATGC ACGAGCGCGT CTTCGCTCCG GCTGGTCTGC GCGACACATG GCTGGCGCCG
CCGGAAGACC TTTTCCCACG CATCGTCCAC GTTGGCGGAA CGCTCGATCC CGGCAGCCCG
ACCGAACGGT TCAACTCGGC TCACGCGCGG CGACAGACAC ATCCGGCCGG CAGCGTGCTC
GCCACAGCGC GAGACGTTGC GCGCTTCTTT CAGGTTGTGC TGAATGGTGG CGCCATTGAC
GGACGACAGG TGATCTCCCC AGTTGCGGCG CGCCTCATGA TCACCAACCA GACACCGGGA
CTGCGTGGAG GCATTGAAGG GTTTATGACC TGGGACGACT GCGCCTGGGG TTTAGGGTTC
GATCTGCGCG GCAACAAACA CCCGCACTTC TCCGGCGAAT TTACCTCACC AGCCACCTTC
GGGCACACCG GCATCTCCGG CGTTTTCGCC TGGGCGGACC CGGCGCTTGA TCTGGTGTGC
GTGATGCTGG CAAATCGCAC CCTCTTCGAT CAGTGGAACA CCTCGCGCTG GTCGCGCTTT
TCGACAGCGG TTGTCGCCTC ATTGACAGGG TAA
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| Protein sequence | MKNVKLTIDP KRLQRAYDIL QRWLDERIVT AIASVLLHRG RLAGEFYGGS AAPAPNAPPI
NGNSLFHIAS IGKPMTAFAV MLLVEAGRLT LDDPVADILT EFRGAGRDVI TVRQLLTHTS
GLPQDPDRSR LPPNATTSEE LRTYLAAGPI VPPGSKVEYS NVGYGLLGLI IEEVGRQSFA
SFMHERVFAP AGLRDTWLAP PEDLFPRIVH VGGTLDPGSP TERFNSAHAR RQTHPAGSVL
ATARDVARFF QVVLNGGAID GRQVISPVAA RLMITNQTPG LRGGIEGFMT WDDCAWGLGF
DLRGNKHPHF SGEFTSPATF GHTGISGVFA WADPALDLVC VMLANRTLFD QWNTSRWSRF
STAVVASLTG
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