| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0569 |
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| Symbol | |
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| ID | 5538032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 760634 |
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| End bp | 762010 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892730 |
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| Product | winged helix family two component response transcriptional regulator |
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| Protein accession | YP_001430716 |
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| Protein GI | 156740587 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000188516 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.315982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGA ATGCAGGTGA GCCTATGAAC CCTTTTGGCA ACCGCAAGCC GGTCATTGCT
CCTGATCTGT TCACTGGGCG ACGCGATCTT ATCGCAGCCG TCTGCGAGCG CCTGACGGCT
GCGCCGCCGC AATGCTGCGC GATCATTGGC GATGCTCGGA GCGGAAAGAC CTCACTGCTC
TACTATCTGC GCAGCGCAGC GCCGGGGCGC CCGATCTGCG GCGACACGAC GGCGCGATTT
GTTTTCTCCT ACGTCAATGC TGGTCCCTAC GCCGATCTCG GTGCTTCACA GAGCCATGGC
GCGCTCTACT TCTGGCGCGA TCTCGCGCGC GCCACGTCTC AGGCGCTCGA CCGGCACGAT
GATCTTCCTG CGCTGCCGGA TCAGGGTATC GCCGAAACGG CGATTGTCGA TGCAGTCTAC
GCGCTCAAGT GCGTGGTCGA GGACATGCTC CGGCAACGCA GTGACCGCAC GTTTGTGTTT
CTCATCGACA ATGTTGAGGG GATTGCTCGC CTCCCGCGCC ACACTGCCAG TTTTTTGCGC
TCGCTGACGC AGGACCCCGA TATTGGCGCG CGCGTCGCTT ACGTGGTGAC TGCCAGCGTG
CCCTTAAGCC GGCTCTATCC GGCGGACGAG TTGCGCGAGC CGTCCTCCTT CTGGAGTCTG
TTCGCCAGCG AACTCTTTAT CGGCGGTCTT GATGACGCCG ACATTACCGC GCTGTTCGGA
CGCGCGCCGG AGTTGAACGA CGCCGACCGC GCGTGGATCC GGCGGCTGGG TGGCGCCAAT
CTGATGCTGC TCCTGATAGC GGCTGCGCAC GTCTACCACT GGCGGATGCA CCCCAATGGC
AGCAGCCCCA ACGATATCGA ACGCGCTGCA ATCGAGGAGG CGCGCCCGCT CTGCCGAACC
TGGTGGCGCA AATTGCTGGA GACGTATGCC ATAGCGACCG ATGCGCGCGA GGCGCTGCTT
GAGCAAAACC GCGCCCCAAC CTCTGATGAA GGCGTGCTCT TCGATGCGCT CCGACAGCGT
GGTCTGGCGC AACGCGACCG AAACGGCTGG CGGATCAGTT CGACCATCTT CGCTCAGGCG
TTGTCGGATC AGCCTGGCAT GCCCTCAATC GAAACATCCC TGCCGTTGCC CTCTGCACCG
CCGGCCTTTA CTCATCTCGA AGGGGAAGTG TATGCGTTTC TGCGTGAACA TGCCGGGCGC
GTCTGCACCC GCGACGAGGT CAAGCGCGCT ATCTGGCCCG TTTCTCCGCC GTCCGACAGC
GCGTTGCAGA AGATTATCGA GCGCATCCGC GACAAAATCG AGCCTGACCC CAAACATCCC
CGTAAACTGA TTGCCGTGCG TGGCCAGGGA TATATGCTGC GCCGCGACGT CGAATAA
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| Protein sequence | MSLNAGEPMN PFGNRKPVIA PDLFTGRRDL IAAVCERLTA APPQCCAIIG DARSGKTSLL
YYLRSAAPGR PICGDTTARF VFSYVNAGPY ADLGASQSHG ALYFWRDLAR ATSQALDRHD
DLPALPDQGI AETAIVDAVY ALKCVVEDML RQRSDRTFVF LIDNVEGIAR LPRHTASFLR
SLTQDPDIGA RVAYVVTASV PLSRLYPADE LREPSSFWSL FASELFIGGL DDADITALFG
RAPELNDADR AWIRRLGGAN LMLLLIAAAH VYHWRMHPNG SSPNDIERAA IEEARPLCRT
WWRKLLETYA IATDAREALL EQNRAPTSDE GVLFDALRQR GLAQRDRNGW RISSTIFAQA
LSDQPGMPSI ETSLPLPSAP PAFTHLEGEV YAFLREHAGR VCTRDEVKRA IWPVSPPSDS
ALQKIIERIR DKIEPDPKHP RKLIAVRGQG YMLRRDVE
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