| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0568 |
|---|
| Symbol | |
|---|
| ID | 5538031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 760029 |
|---|
| End bp | 760400 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640892729 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430715 |
|---|
| Protein GI | 156740586 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000883944 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.25409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA AACCGCAATT AGTCATCATC ATCACCCACG CCGGGCACGA TCCCGGCGCC
GCAACGCTGG GTTTTCTGAC CGCCAGCGCG GCGCTTGCCG CCGGAAATCG CGCCGCGGTG
CTGCTGCGCG GGGAAGGCGT TTTGTGCGCC ACATCCGAAG GATGGGCCGC CGGTTTGCAC
GCGGCAGGAT ATCCGCCGTT GCGTGAGGCG CGTGATGCCT ATCGCACAGC CGGAGGAACG
CTGTATCTGT CGCAGCCGTG TCTCCGGCGC TACTGGCTCA ACGCTGATAA CGGTCTTTTG
CCGGATGTAC GTGTGCTGAG CATCGCGGAC ATAGCGGCGC TCTGTGTCGG GACGACCACA
GTAACGTTCT GA
|
|---|
| Protein sequence | MTTKPQLVII ITHAGHDPGA ATLGFLTASA ALAAGNRAAV LLRGEGVLCA TSEGWAAGLH
AAGYPPLREA RDAYRTAGGT LYLSQPCLRR YWLNADNGLL PDVRVLSIAD IAALCVGTTT
VTF
|
|---|
| |