| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0520 |
|---|
| Symbol | |
|---|
| ID | 5537983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 678274 |
|---|
| End bp | 679524 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640892682 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001430668 |
|---|
| Protein GI | 156740539 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCA TTGGCATCGT CGGCTGTGGT CGGATTCTGA ATGCGCACCT TCAGGGATAC
CTGCAACTGC GCCGGTTGGG AATCGACAAT TTTCGCATTA CGGCGCTCTG TGCGCGCAGG
CTCGAAGATG CGCTCATGTT TCGCAAACGC GGCGAGGGAC CGCCACCCCG TCCGCCGGTG
CTCGATCCGG CGACCGGCGA TCCGCTGGCT GCGCCGCACA CGTATGTGTC CGACATCCAC
GATGATGTGG AGGTCGCCGT CTACACCGAC TACCGCGACC TCATCGCATC GGGCAAGGTG
GATGCGATTA ATGATCTGAC GACGCTGGCG CTGCACCATC AGGTGGGGCT TGCCGCCATT
GATGCCGGGT TGCACCTGCT GTCGCAGAAG CCGCTGGCGA TTTCGGTTCG CGCTGCGAAG
AAAATGGTGA CGGCTGCAAA AGCGCGGGGG GTTACCTTTG GCGTGTTTGA GAATGTGCGC
CAGGCGCGCG GCGTGCGCGC GATGGCGTGG GCAGTGCGCC AGGGGTTGAT CGGCGAGCCG
CAGATTTCGG TTATGGGATT CCTCGGCGGT CTCTGGTCGC CGGATCGGGT CGTGGCAGAA
ACGCCGTGGC GCCATAAGAA ACTGCTCGGC GGCGGCGGCG GCAGCATCGA CATTGGGGTG
CATCAGATGC ACCTCCAGCG CTATGTCGTC GGTGAAATCG CTGCGGTGAG CGCCGTTGCG
CGCACCTTTG CGCCGGTTCG ATATCTGCGC GACCCGCAGG GCAATGTTCT CGATCAGGTG
CAGGCGGATG TCGATGACAC CTTCATGGCG ACCCTGCAAT TCGAGCGTGG CGCGATCGGA
CAATTGTGGT GGAGTTGGGC TGGTTCGCCA GAAGAAGTGT CGATCAGCGG CGCGCCGGCA
ATCATTGGCA GCAAAGGGGT TATTCGCAAC GGGCAGATTG TGACGGCGGA CGGTGAGCGT
CTGCCGCTGG ACGAGACGTT TGAGCAGGAG ATGACGCCTG CTGAACGCGA GCGGTTCTTT
CCTCTTGGAT TGACCGACCC CTGCGCCATC CAGAACCTCG ACTGGTTGCG CGCAATCGAG
TGCGGCGCCG ATCCGGAGAC CAGCGGCGAG GAGGGGTTGC GCGACCTGGC GTGTGCTTTC
GCCATCCTCG AGTCATCGGC GCTGGGGCGC ACTGTGACGC AGCAGGAGGT GCTCGATGGC
GCTGTGGACG CCTATCAGCG CGCTATCGAC GAACATTACG GGCTTCTCTG A
|
|---|
| Protein sequence | MIRIGIVGCG RILNAHLQGY LQLRRLGIDN FRITALCARR LEDALMFRKR GEGPPPRPPV
LDPATGDPLA APHTYVSDIH DDVEVAVYTD YRDLIASGKV DAINDLTTLA LHHQVGLAAI
DAGLHLLSQK PLAISVRAAK KMVTAAKARG VTFGVFENVR QARGVRAMAW AVRQGLIGEP
QISVMGFLGG LWSPDRVVAE TPWRHKKLLG GGGGSIDIGV HQMHLQRYVV GEIAAVSAVA
RTFAPVRYLR DPQGNVLDQV QADVDDTFMA TLQFERGAIG QLWWSWAGSP EEVSISGAPA
IIGSKGVIRN GQIVTADGER LPLDETFEQE MTPAERERFF PLGLTDPCAI QNLDWLRAIE
CGADPETSGE EGLRDLACAF AILESSALGR TVTQQEVLDG AVDAYQRAID EHYGLL
|
|---|
| |