| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0517 |
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| Symbol | |
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| ID | 5537980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 672823 |
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| End bp | 675333 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892679 |
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| Product | spermine synthase |
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| Protein accession | YP_001430665 |
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| Protein GI | 156740536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAGG CGCAGCAGAC AGGGGTGGTG TTCGCTCTCT TTTTCGTGAG CGGCGCGAGT
GGTCTGATCG ATGAGGTCGT GTGGTTCCGC CTGCTCAGCC TCAGTTTTGG CGTCAGCGTG
TATGCCGCCA GCGCGGTCTT GACCGCCTTC ATGGGCGGGC TAGCGCTGGG GAGTTGGGCG
TTTGGCAGAA TCACCGCGCG CCTGACACAG CGCCATAAAT CGGAAGCAAC TGCAACAGCG
CTTCTGCGCC TGTTTGCTCT GCTTCTGATG GGGGTTGCGC TCTTCGCTTT TGCGACGCCT
GCGCTCTTTT CCAGCCTGAC CAACCTGTAT GTCTGGATTG CGCACCGGCT TCAGCCCGAA
CCCTTCGCAT ACCATGCGGC GCGTACTGCG CTCGCGACGC TGGCGCTCGT GCCGCCGACT
TTTCTGATGG GTGGCACACT GCCGCTGCTG GCGCACCTGC TGGCAGTGCG ACACCGGGAT
CACGGACGGC GGCTCGGCGC ACTCTATGCG ATCAATACGT TCGGCGGCGT GCTGGGGGCG
CTGGCTGCGG GTCTCGTCCT GATTCCTTCG CTTGGCGTCA GCGGGTCGCT CTATCTTGGC
GGTGCGCTGG ACCTGACGGC GGCTGGGGTT GCGTTCTGGC TGGCGCGCAC CTGGCGGGAA
GCGCCGCTTG ATCCTGCCGC CACACCACAG CCTGCCGCAT CTGCGCCGAC CCCAACACCA
CGCCACGCAA GCCGCCCGTT GGCGCAGCGG GCATCGGGCG GGCGGGCTGT CGTGGCAGTC
CAGGCGATGG GCGCGTCCGC GACAGATGCG CCTGCTGCAC ACAATGGCGC GATTGCGACG
ACAGCGATGC CGTCTGCTTC GAAGCGAGCG CTGCCATTGC CGACGCCAGC GCGCCTGGCG
CTGATCGGGT ATACACTGTC CGGTTTTGCG GCGCTGGGAT ATCAGGTGGT GTGGACCCGC
ACGCTGGCGA TCTTCAGTCT GAACGCGGTC TATTCGTTCA CCATCATGCT GGTGACGTTT
CTAATCGGTC TGGCGGTTGG CAGCGCCTGG ATGGGGCGGC GGATCGACCG GTACGAGCAG
CCGCTGGCGC TCTTTGGCTG GTTGCAGATC GGGATCGGAA TGAGTGCCGT GATTGCGCTC
TACGCCTTTG CGCGCATGCC GACCCTGCTC GATATATTCA CTGCCAGAAC CGGCTTCCTC
GCCTCGCTGT GGGCGGAGTT CTTCGCCGCC GCAGTGATCA TGATGATGCC AACGCTCCTG
ATGGGAGCGG TTTTTCCTGT GGCGGCGCGA TTGTATGCTA CGCCTCCCGA CACAGACAAT
CCTGTTGCGC CGGATCGGGG CGGGGTGGGG GCGCGTGTTG GGCGGCTCTA TGCGCTCAAC
ACCGTTGGCG CAACGCTGGG CGCGTTCATG GCTGGCTTTG TCTTCATTCC GCTGATCGGG
CTGCAACATT CTTCGCTCCT GCTTGCGATG CTGAACCTGG CGCTTGGCGC TGGGGCGACG
CTACGGGCGT CGCCGACATT GGGAGAACGG CTGCGCCTGG CGGGGGTGAC GGGCGCGACG
CTGCTTGCAG CGGCGTTGTT GCCGCCTGGC GTCTACCTCG GTTTCCGCGA GGGCGTGATC
CCGGAATTGG TGTACTACCG CGAGGGAGTG GACGCAACGG TGGCAGTGTT CGAGGTCAAA
TACCCGCCGC TCAAGATGTC GTTCGTCAAC GGACGTAATG AGGTTCCAAC CGATAAACAC
AGCATGCGTG CCTTCCATGT GCTCGGTCAT CTGCCAGCGC TCCTGCGCCC CGATGCGCAG
AATGCGCTGA TGATCGGCTT CGGCAACGGT ATTGCTTCTG GTGCGATGGC AACCCATCCG
CTCCCGCGTA TCCATGCCGT TGAACTGGTT GCCGAACAGG TTGAAGCAGC GCGTCTCTAC
GAAGCCGAAA ACCGCAGCGT GCTGGATCGC CCCGGATTTC AGATTACGAT TGAGGATGGG
CGCAACTACC TGCTGCGCAG CGCCGAACGC TACGATATTA TTACCGCCGA CGCGACTCAT
CCGATCAACA GCAGCAGTTG GGCGTTGTTC ACCTTCGAGT TCTACACGAT GGTGAAAAGT
CGCCTCACCG ATGATGGCGT CTTCGTTCAG TGGCTGCCGT TTCACGATCT CTCGGAGCGC
GATTACCGCG ATATTGTGTG CACATTTCAG CGTGTCTTTC CGCATACCAC GCTGTGGTAC
ACTGGCGCAA CGCATAGTTT CCTGGTCGCA ACCCCGCGTC CCCTGACGCG CGATCAGGTG
CTGGCGCTCG ACGTGCAATT GAGGCAGTCG GCGGCGGGCG CAGACCTCGG CGATGGTCGG
TTGCTGGCGG CTGACCTGAT TATGCACGAG GAGGAGGTTG CGGCATTCGC GGCGAACGGG
CGGATTGTGC GTGATGATCG TGCCTTTTTT ATTCCGGCTA TGGATCGCGA GCGCATTCTG
GCGGCGCTCG AACCGTATGC GCGCGCGGCG GCGCGTGATG CAGGACGTTG A
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| Protein sequence | MKQAQQTGVV FALFFVSGAS GLIDEVVWFR LLSLSFGVSV YAASAVLTAF MGGLALGSWA
FGRITARLTQ RHKSEATATA LLRLFALLLM GVALFAFATP ALFSSLTNLY VWIAHRLQPE
PFAYHAARTA LATLALVPPT FLMGGTLPLL AHLLAVRHRD HGRRLGALYA INTFGGVLGA
LAAGLVLIPS LGVSGSLYLG GALDLTAAGV AFWLARTWRE APLDPAATPQ PAASAPTPTP
RHASRPLAQR ASGGRAVVAV QAMGASATDA PAAHNGAIAT TAMPSASKRA LPLPTPARLA
LIGYTLSGFA ALGYQVVWTR TLAIFSLNAV YSFTIMLVTF LIGLAVGSAW MGRRIDRYEQ
PLALFGWLQI GIGMSAVIAL YAFARMPTLL DIFTARTGFL ASLWAEFFAA AVIMMMPTLL
MGAVFPVAAR LYATPPDTDN PVAPDRGGVG ARVGRLYALN TVGATLGAFM AGFVFIPLIG
LQHSSLLLAM LNLALGAGAT LRASPTLGER LRLAGVTGAT LLAAALLPPG VYLGFREGVI
PELVYYREGV DATVAVFEVK YPPLKMSFVN GRNEVPTDKH SMRAFHVLGH LPALLRPDAQ
NALMIGFGNG IASGAMATHP LPRIHAVELV AEQVEAARLY EAENRSVLDR PGFQITIEDG
RNYLLRSAER YDIITADATH PINSSSWALF TFEFYTMVKS RLTDDGVFVQ WLPFHDLSER
DYRDIVCTFQ RVFPHTTLWY TGATHSFLVA TPRPLTRDQV LALDVQLRQS AAGADLGDGR
LLAADLIMHE EEVAAFAANG RIVRDDRAFF IPAMDRERIL AALEPYARAA ARDAGR
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