| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0514 |
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| Symbol | |
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| ID | 5537977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 668973 |
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| End bp | 669980 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640892676 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001430662 |
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| Protein GI | 156740533 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.950902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTGC AGACGGCGCA GGTTCCAGCC CGGCAAAAGC GCAAGCCTGC CCTGTTCGGC
TTGATCCCGG CTGGAAAGAT CGAGCGACGC GAGGCGCTCT GGTTCTGGAT CTTCATCTCG
CCATGGGTCA TCGGGTTTCT GGCGTTTACG CTTTACCCAA TCGTCATGTC CGCCTATTAC
AGCATGACGG TCTTCAATGT GGCGAGTCCG CCAGTCTGGG TTGGTTTCGA GAACTACCTC
GATCTGTTCA ATGATCGGGT GTACTGGAAG TCGCTCCAGG TGACGGGCTA CTACACCCTG
TTGAGCGTTC CATTAGGCAT CGCCTTTGGT TTGATGCTGG CGGTGCTGCT CAATCAGCGT
GTTCCGGCGC TTGGCGTCTT TCGCACGCTC TATTACCTGC CTGCATTACT GACCGGAAGC
GTTGCTGTGG CGCTGCTCTT CTCCTGGCTG CTCAACCCGC AATTCGGTGC GATCAACCTG
ATCATTCGCA ATCTGGTCGG TCCAAATGGT CTGATCCCGC TGGGCATTAC CGGCCCGCGC
TGGTTGCAGG ACCCGAACTG GGTCATTCCG TCGTTTACGT TGATGTCGCT CTGGGGCTTC
GGCGGCACCA TGCTGATCTA TCTCTCGGCG CTTCAGGGTG TTCCCACCGC GTTGTATGAA
GCCGCCGAAA TCGACGGCGC CAACCGCATT CAGCAGTTCT TCAACGTCAC TGTTCCGATG
ATTTCGCCGG TTATTCTCTT CACCTTCATT ACCGGCGTCA TTGGCGCGAT GCAGCAGTTT
ACCGCAGCAT ATGTCATTTC GGGCGGCATG AACCTTGGTG CGCCCGCTTA TTCGTCGATG
TTCTACAACC TGTATCTCTT CCTGAATGCG TTCCGCCGCT ACCGGATGGG GCTGGCATCC
GCGCAGGCGT GGATCTTGCT GATCGTCATC CTGTTGCTGA CTCTGGCGAT GTTCTGGGCG
TCACGCCGCT ATGTTCACTA TGAGTCGGAC GAAGAGGGAG CGATCTGA
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| Protein sequence | MAVQTAQVPA RQKRKPALFG LIPAGKIERR EALWFWIFIS PWVIGFLAFT LYPIVMSAYY
SMTVFNVASP PVWVGFENYL DLFNDRVYWK SLQVTGYYTL LSVPLGIAFG LMLAVLLNQR
VPALGVFRTL YYLPALLTGS VAVALLFSWL LNPQFGAINL IIRNLVGPNG LIPLGITGPR
WLQDPNWVIP SFTLMSLWGF GGTMLIYLSA LQGVPTALYE AAEIDGANRI QQFFNVTVPM
ISPVILFTFI TGVIGAMQQF TAAYVISGGM NLGAPAYSSM FYNLYLFLNA FRRYRMGLAS
AQAWILLIVI LLLTLAMFWA SRRYVHYESD EEGAI
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