| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0476 |
|---|
| Symbol | |
|---|
| ID | 5537939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 615895 |
|---|
| End bp | 617133 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640892638 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430624 |
|---|
| Protein GI | 156740495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.296248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGT CGGTCTTCGT GTTCGCGTAT GACCTGGCAG ACGAAGGGTA CGGACATGTT
CTCGACACGG TGCGCGACCG CGCTGGCGCC AACGCCGTGA ACCTGGCATG CAGTTACCAC
CATGCCCGCG ATGTTTTCCC ACACAATCCG AGCCGAAAGG TGCGCTTCCT GGAAGGCGGG
GCTTGCTTCT TTCGCCCGAA TCCGGCGCGC TATGCCGATC TCCGCATACA GCCGATCCTC
AGCCGCCTGA CCGATGACCA CGATCCCCTG GATCGCTGCA TCGCCGAAGC CGAACGGCGG
GGTATGGCCG TGCGCGCATG GACGACCAAC CTGCACAATA CCGGTCTTGG TTCACGCTAC
CCCAATTGCA CGTTGCAGAA TGCGTTTGGC GATCCGTACA TCACTTGCCT CTGCCCGGCA
AACCCCGATG TGCGCGCCTA TCTGTGCGCT CTCAGCGCCG ACATTGCCGG TCGCGGCGTG
CAGGCTCTTC TTCTCGAGTC CATCGGCTAC CATTCCTTCG ATCACGGCTA TCATCACGAG
CGCAGTTTTG TGCCGTTGGC GCCCGCCATC CGCTTTCTCC TCGGTCTCTG CTTCTGCCCG
CATTGCACCG CGCGCCTGAA CGCCAGCGGC GTCGATGTGG CGCATGTGCG TCGGTTTGTG
CAGACCGAAG TGGGGAAGGT GTTTGACGGC GAGCCGGGCA ACGTCGAGGA TATTCCTGTT
GAGCGCCAGG CGCTGGCAAC GCTGGCAGAC GGCGAACTCG GCGCCATGCT CGATGCGCGC
CGCGCCATTG TGACGTCGCT CGTCGCCGAG ATCACCGATG CCGTCAGTGC TGCTGGTTCG
ACGCAAGTTA TCGCCATGGA TATGTCGGGC GCCGCGCTTG GGTACGCGAC CGGTATGCCC
ACCGGCGCCC AGGCGCCGAT GCGCGCCTGG GAGGACGGGC TTGACCTCCC GGCAGTCGCA
GCCGTGTGCC ACGGGATAGC AGTGCTCGCC TACGCCCGTG ACGTTGAGCG TGTGCGCGCC
GACCTCGACG CTTATGCACA TCTGCTGCCC GCAGGCGTCA GCCTTACGGT CGGGGTGCGT
CCAATGCCGC CGGATTGCCA CAGCGCCGCC GAAATGACCG CGAAGGTGAC GCTCCTGCGC
GAACGCGGCA TTGACAGCAT GGATGTGTAC CATTACGGAT TGATGCGACT GAAGCACCTC
GATTGGGTGG GGGAAGCGGT GCGGAACACG GCGGGTTGA
|
|---|
| Protein sequence | MQTSVFVFAY DLADEGYGHV LDTVRDRAGA NAVNLACSYH HARDVFPHNP SRKVRFLEGG
ACFFRPNPAR YADLRIQPIL SRLTDDHDPL DRCIAEAERR GMAVRAWTTN LHNTGLGSRY
PNCTLQNAFG DPYITCLCPA NPDVRAYLCA LSADIAGRGV QALLLESIGY HSFDHGYHHE
RSFVPLAPAI RFLLGLCFCP HCTARLNASG VDVAHVRRFV QTEVGKVFDG EPGNVEDIPV
ERQALATLAD GELGAMLDAR RAIVTSLVAE ITDAVSAAGS TQVIAMDMSG AALGYATGMP
TGAQAPMRAW EDGLDLPAVA AVCHGIAVLA YARDVERVRA DLDAYAHLLP AGVSLTVGVR
PMPPDCHSAA EMTAKVTLLR ERGIDSMDVY HYGLMRLKHL DWVGEAVRNT AG
|
|---|
| |