| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0453 |
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| Symbol | |
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| ID | 5537916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 573769 |
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| End bp | 576255 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892616 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430602 |
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| Protein GI | 156740473 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATG TTCAACATTC TTCCTGGCGC AGATATCTGG GGCTGGCGCT GGTGACGGCG
AGCATTCTGG CGTTGCAGGT GACGTTCACC CGCATCTTTT CGATCATGAT CTGGCACCAC
TTTACCTACC TGATCATCGG AGTAGCGTTG CTCGGCGGCG GCGCGTCCGG CACATTCCTG
GCGGTGCGCG CGTGGGATGC GGATACTCTC AAGCGTCGGC TGGGGAAACT TGTTGTTGCG
TATAGCCTGA TGGTGCTGAT CAATCTGGCG ATCATCGGCA GCATCGCCAT TGATCCGTTG
CGCGGCGGTC AGATCGCGCA CACCCTCATC GGTCTGGCGG TATATTTCGT CGGACTCTTC
ACAACGTTCT TCCTCGGCGG ACTGATCGTT TCCGGCGTGT TCACCTTGTG GCACCGGGAG
GCGCACCGGC TCTACTTTGC CGACATGCTG GGCGCCAGTG TGGCGACGCT GGCGATTGTG
TGGGTCATTC AGATGATCGG CGGTCCCGCA ACGATTGTGC TGACGGCGCT GCTCACATTG
GCGGGCAGTG CGTTGTTTGG TGTTGCGTCG GGACGGCGCT GGCGCATTGG CGCTGCCATT
CTCGGCATCG GGCAGGCGGC GCTGATCGGA TGGCTTCTGA TCGGTGCGTC GCTGCACCTG
CCTGTGCCCG GCTCGAAAGA ACTTGGGTGG GCGCAGCAGC AGTTCAACAC GTACCCGGAG
TACACGCGCT GGAATCCGGT GGGGCGCGTG GATGTATTGC CAACCATTCA GGTAAAGGAA
CCGATGATTG TCGGCGGCAT CAGCAAGGTC TATCTGGCGA GCGACGCGTT TCAGCGCGCG
CCATTGTACG ACCTGAAACT GGTGACCCTC GATGGCACGT CGATGACCGG CATGTACCGG
TTCGACGGAA CGGACGAGGA CCTGAAGCGC TTCCGCTTCC TCGATCACGC GATCATCAGC
GCGCCGTACC ACATGGGTTT GAAGCACGAC ACTGCGTTGA AGATCGGGAT CGGCGGCGGT
CTCGACATTC TGCTGGCGCG ATTGTATGGG GCGCAACAGA TTACCGCGAT TGAGTTGAAT
GCCGATGTCG TGAAGTTGCT GGAAGGACCG TACCGCGAGT TCAGCGGTAA TCTCGCCGGC
CATCCCTCTA CCCGGATTGT TGTTGCCGAG GGGCGTAGTT TCCTGACGCG CGATGCCACA
ACCTATGATC TCATCCAGGG CATTGGGCTT GATAATCTGG TGGCGCTCTC TGGCAGCGCA
TATGTTCTGT CGGAGTCGTA CATTTACACG GTTGATTCGT TCACCCTGAT TCTGAACCGG
CTCAACCCGA AGGGAGTTTT TGCCTGGACG CGCAACGTCG ATCAGCCGCC GCGCGAAATG
CTGCGGATCA CGGCACTGGC TGCCGAGGCG TTGCGTCGTC GCGGCGTCGC CGATCCTGCG
TCGCACATTG CCATCGTCGC CAACGACACC AATACTCAGG CGACGCTGCT GGTGTCGCCG
TCGCCGTTCT CCCCAGAGGC CATTGAGCGG CTGCGGGCAT GGGCGGAATC CAATGCGTTC
GCCGTGCTGC ACGATCCGTT ACAGCGGCTC GATACCGTGT ATGCGGAGTA TCTGCATGCG
CCGGATGCGC GCGCTTTCGA GGAGGCGTAT CCGTTCAACA TCTTCCCGGT AACGGATGAT
AATCCGTTCT TTTACAATTA TTTCAAGTGG CAAAATCTAA CCTTCGACCA GGCGTTCACC
GGCAAACTCA ACCGCTTCCC GATTGGGAAT CTGATCCTGA TCGTTATGTC CGGCTTTTCG
CTGGCAAGCG CAGCCACGTT TATCGTTGCA CCGTTGTGGC GTCACAACCG ACGCGGCTTG
CGGTTGCCAA TGGCGCGCCC GATGTTGATT TACTTCAGCG CTCTGGGCAT TGGCTACATT
TTCGTGCAGA TCGTGCTGAT CCAGCGCTTC ACGCTCTTCA TCGGCTATCC CACAAGCGCG
ATTACGACAA CGATCTTCAG TATGCTCCTT TTTTCGGCAG TGGGAAGCCT GCTCAGCCGT
CGTCTGATCG ATAGATCCGC CCATCTTCGG ATAGCGTTGG CGGCAATTGT TTTGGCGATT
GGTGTGTATA TTGTTGCGCT ACCGCCGCTG TTTCAGGCGT TGCTGCACCT GCCGGACGCC
GCGCGCATAG CGTTGAGCGT CCTGATCATT GCGCCGCTTG CGTTGCTCAT GGGCATGCCG
TTCCCCACCG GTTTGCGGCA ACTTGGCGCG CATGGCGCCG AATTGGTGCC GTGGGCATGG
GGAATGAACG GGGTCTTTTC GGTGGTCGGC TCGACGCTGG TGATTATCAT CAGCATGGCC
AGCACCTTTA CTGTCGCAAT GGCATGCGCG GCGTTGTTCT ACGGAGTCGC TGCCATTGTT
GCTGCGAGGC TCTACCGTCG GGTGGAGGTG CGGTTGCCTG GAGTTGCGGG GGCGCCGGTG
GATGTGGTGG AGGGGGTCAG GGGGTAG
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| Protein sequence | MTNVQHSSWR RYLGLALVTA SILALQVTFT RIFSIMIWHH FTYLIIGVAL LGGGASGTFL
AVRAWDADTL KRRLGKLVVA YSLMVLINLA IIGSIAIDPL RGGQIAHTLI GLAVYFVGLF
TTFFLGGLIV SGVFTLWHRE AHRLYFADML GASVATLAIV WVIQMIGGPA TIVLTALLTL
AGSALFGVAS GRRWRIGAAI LGIGQAALIG WLLIGASLHL PVPGSKELGW AQQQFNTYPE
YTRWNPVGRV DVLPTIQVKE PMIVGGISKV YLASDAFQRA PLYDLKLVTL DGTSMTGMYR
FDGTDEDLKR FRFLDHAIIS APYHMGLKHD TALKIGIGGG LDILLARLYG AQQITAIELN
ADVVKLLEGP YREFSGNLAG HPSTRIVVAE GRSFLTRDAT TYDLIQGIGL DNLVALSGSA
YVLSESYIYT VDSFTLILNR LNPKGVFAWT RNVDQPPREM LRITALAAEA LRRRGVADPA
SHIAIVANDT NTQATLLVSP SPFSPEAIER LRAWAESNAF AVLHDPLQRL DTVYAEYLHA
PDARAFEEAY PFNIFPVTDD NPFFYNYFKW QNLTFDQAFT GKLNRFPIGN LILIVMSGFS
LASAATFIVA PLWRHNRRGL RLPMARPMLI YFSALGIGYI FVQIVLIQRF TLFIGYPTSA
ITTTIFSMLL FSAVGSLLSR RLIDRSAHLR IALAAIVLAI GVYIVALPPL FQALLHLPDA
ARIALSVLII APLALLMGMP FPTGLRQLGA HGAELVPWAW GMNGVFSVVG STLVIIISMA
STFTVAMACA ALFYGVAAIV AARLYRRVEV RLPGVAGAPV DVVEGVRG
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